RNA–Protein interactions for RNA: ENST00000515974.1

RNU6-1170P-201, Transcript of RNA, U6 small nuclear 1170, pseudogene, humanhuman

BASIC

Gene RNU6-1170P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1170P-201ENST00000515974 AEBP2Q6ZN18 517 aaPredicted RBP21.79■■□□□ 1.08
RNU6-1170P-201ENST00000515974 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
RNU6-1170P-201ENST00000515974 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
RNU6-1170P-201ENST00000515974 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
RNU6-1170P-201ENST00000515974 FOXD1Q16676 465 aa17.28■□□□□ 0.36
RNU6-1170P-201ENST00000515974 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
RNU6-1170P-201ENST00000515974 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
RNU6-1170P-201ENST00000515974 ADRA2BP18089 450 aa16.11■□□□□ 0.17
RNU6-1170P-201ENST00000515974 MSH5O43196 834 aa16.09■□□□□ 0.17
RNU6-1170P-201ENST00000515974 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
RNU6-1170P-201ENST00000515974 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
RNU6-1170P-201ENST00000515974 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
RNU6-1170P-201ENST00000515974 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
RNU6-1170P-201ENST00000515974 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
RNU6-1170P-201ENST00000515974 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
RNU6-1170P-201ENST00000515974 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
RNU6-1170P-201ENST00000515974 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
RNU6-1170P-201ENST00000515974 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
RNU6-1170P-201ENST00000515974 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
RNU6-1170P-201ENST00000515974 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
RNU6-1170P-201ENST00000515974 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
RNU6-1170P-201ENST00000515974 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
RNU6-1170P-201ENST00000515974 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
RNU6-1170P-201ENST00000515974 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
RNU6-1170P-201ENST00000515974 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
RNU6-1170P-201ENST00000515974 KCNA4P22459 653 aa13.47□□□□□ -0.25
RNU6-1170P-201ENST00000515974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
RNU6-1170P-201ENST00000515974 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
RNU6-1170P-201ENST00000515974 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
RNU6-1170P-201ENST00000515974 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
RNU6-1170P-201ENST00000515974 DSG3P32926 999 aa12.92□□□□□ -0.34
RNU6-1170P-201ENST00000515974 CAPN15O75808 1086 aa12.9□□□□□ -0.34
RNU6-1170P-201ENST00000515974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
RNU6-1170P-201ENST00000515974 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
RNU6-1170P-201ENST00000515974 APLP2Q06481 763 aa12.71□□□□□ -0.37
RNU6-1170P-201ENST00000515974 TRHP20396 242 aaPredicted RBP12.7□□□□□ -0.38
RNU6-1170P-201ENST00000515974 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
RNU6-1170P-201ENST00000515974 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
RNU6-1170P-201ENST00000515974 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
RNU6-1170P-201ENST00000515974 ABCB7O75027 752 aa12.63□□□□□ -0.39
RNU6-1170P-201ENST00000515974 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
RNU6-1170P-201ENST00000515974 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
RNU6-1170P-201ENST00000515974 ZBTB22O15209 634 aa12.44□□□□□ -0.42
RNU6-1170P-201ENST00000515974 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
RNU6-1170P-201ENST00000515974 POLA2Q14181 598 aa12.41□□□□□ -0.42
RNU6-1170P-201ENST00000515974 POTEHQ6S545 545 aa12.31□□□□□ -0.44
RNU6-1170P-201ENST00000515974 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
RNU6-1170P-201ENST00000515974 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
RNU6-1170P-201ENST00000515974 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
RNU6-1170P-201ENST00000515974 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
RNU6-1170P-201ENST00000515974 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
RNU6-1170P-201ENST00000515974 AKT1S1Q96B36 256 aa12□□□□□ -0.49
RNU6-1170P-201ENST00000515974 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
RNU6-1170P-201ENST00000515974 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
RNU6-1170P-201ENST00000515974 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
RNU6-1170P-201ENST00000515974 FBLN2P98095 1184 aa11.81□□□□□ -0.52
RNU6-1170P-201ENST00000515974 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
RNU6-1170P-201ENST00000515974 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
RNU6-1170P-201ENST00000515974 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
RNU6-1170P-201ENST00000515974 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
RNU6-1170P-201ENST00000515974 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
RNU6-1170P-201ENST00000515974 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNU6-1170P-201ENST00000515974 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
RNU6-1170P-201ENST00000515974 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
RNU6-1170P-201ENST00000515974 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
RNU6-1170P-201ENST00000515974 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
RNU6-1170P-201ENST00000515974 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
RNU6-1170P-201ENST00000515974 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
RNU6-1170P-201ENST00000515974 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
RNU6-1170P-201ENST00000515974 HAX1O00165 279 aa11.46□□□□□ -0.57
RNU6-1170P-201ENST00000515974 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
RNU6-1170P-201ENST00000515974 EVX2Q03828 476 aa11.45□□□□□ -0.58
RNU6-1170P-201ENST00000515974 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
RNU6-1170P-201ENST00000515974 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
RNU6-1170P-201ENST00000515974 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
RNU6-1170P-201ENST00000515974 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
RNU6-1170P-201ENST00000515974 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
RNU6-1170P-201ENST00000515974 GABBR2O75899 941 aa11.13□□□□□ -0.63
RNU6-1170P-201ENST00000515974 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
RNU6-1170P-201ENST00000515974 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
RNU6-1170P-201ENST00000515974 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
RNU6-1170P-201ENST00000515974 PROM2Q8N271 834 aa11.07□□□□□ -0.64
RNU6-1170P-201ENST00000515974 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
RNU6-1170P-201ENST00000515974 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
RNU6-1170P-201ENST00000515974 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
RNU6-1170P-201ENST00000515974 CLCN6P51797 869 aa10.92□□□□□ -0.66
RNU6-1170P-201ENST00000515974 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
RNU6-1170P-201ENST00000515974 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
RNU6-1170P-201ENST00000515974 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
RNU6-1170P-201ENST00000515974 LHX8Q68G74 356 aa10.82□□□□□ -0.68
RNU6-1170P-201ENST00000515974 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
RNU6-1170P-201ENST00000515974 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
RNU6-1170P-201ENST00000515974 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
RNU6-1170P-201ENST00000515974 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
RNU6-1170P-201ENST00000515974 FKBP8Q14318 412 aa10.66□□□□□ -0.7
RNU6-1170P-201ENST00000515974 MIER1Q8N108 512 aa10.66□□□□□ -0.7
RNU6-1170P-201ENST00000515974 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
RNU6-1170P-201ENST00000515974 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
RNU6-1170P-201ENST00000515974 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
RNU6-1170P-201ENST00000515974 RASEFQ8IZ41 740 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms