RNA–Protein interactions for RNA: ENST00000515860.1

LINC00500-201, long intergenic non-protein coding RNA 500, humanhuman

TSL 4 BASIC

Gene LINC00500, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00500-201ENST00000515860 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
LINC00500-201ENST00000515860 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
LINC00500-201ENST00000515860 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
LINC00500-201ENST00000515860 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
LINC00500-201ENST00000515860 FOXD1Q16676 465 aa22.34■■□□□ 1.17
LINC00500-201ENST00000515860 MSH5O43196 834 aa21.09■□□□□ 0.97
LINC00500-201ENST00000515860 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
LINC00500-201ENST00000515860 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
LINC00500-201ENST00000515860 PIAS4Q8N2W9 510 aaPredicted RBP20.88■□□□□ 0.93
LINC00500-201ENST00000515860 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
LINC00500-201ENST00000515860 ADRA2BP18089 450 aa20.62■□□□□ 0.89
LINC00500-201ENST00000515860 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
LINC00500-201ENST00000515860 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
LINC00500-201ENST00000515860 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
LINC00500-201ENST00000515860 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.56
LINC00500-201ENST00000515860 KCNA4P22459 653 aa18.55■□□□□ 0.56
LINC00500-201ENST00000515860 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
LINC00500-201ENST00000515860 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
LINC00500-201ENST00000515860 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
LINC00500-201ENST00000515860 HOXD11P31277 338 aaPredicted RBP18.16■□□□□ 0.5
LINC00500-201ENST00000515860 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
LINC00500-201ENST00000515860 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
LINC00500-201ENST00000515860 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
LINC00500-201ENST00000515860 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
LINC00500-201ENST00000515860 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
LINC00500-201ENST00000515860 C1QBPQ07021 282 aaKnown RBP17.68■□□□□ 0.42
LINC00500-201ENST00000515860 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
LINC00500-201ENST00000515860 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
LINC00500-201ENST00000515860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00500-201ENST00000515860 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
LINC00500-201ENST00000515860 ZBTB22O15209 634 aa17.08■□□□□ 0.32
LINC00500-201ENST00000515860 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
LINC00500-201ENST00000515860 U3KPZ7 1027 aaPredicted RBP16.91■□□□□ 0.3
LINC00500-201ENST00000515860 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
LINC00500-201ENST00000515860 CAPN15O75808 1086 aa16.79■□□□□ 0.28
LINC00500-201ENST00000515860 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
LINC00500-201ENST00000515860 DSG3P32926 999 aa16.69■□□□□ 0.26
LINC00500-201ENST00000515860 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
LINC00500-201ENST00000515860 APLP2Q06481 763 aa16.55■□□□□ 0.24
LINC00500-201ENST00000515860 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
LINC00500-201ENST00000515860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
LINC00500-201ENST00000515860 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
LINC00500-201ENST00000515860 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
LINC00500-201ENST00000515860 POTEHQ6S545 545 aa16.39■□□□□ 0.21
LINC00500-201ENST00000515860 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
LINC00500-201ENST00000515860 ABCB7O75027 752 aa16.35■□□□□ 0.21
LINC00500-201ENST00000515860 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
LINC00500-201ENST00000515860 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
LINC00500-201ENST00000515860 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
LINC00500-201ENST00000515860 POLA2Q14181 598 aa15.93■□□□□ 0.14
LINC00500-201ENST00000515860 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
LINC00500-201ENST00000515860 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
LINC00500-201ENST00000515860 FKBP8Q14318 412 aa15.6■□□□□ 0.09
LINC00500-201ENST00000515860 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
LINC00500-201ENST00000515860 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
LINC00500-201ENST00000515860 FBLN2P98095 1184 aa15.4■□□□□ 0.06
LINC00500-201ENST00000515860 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
LINC00500-201ENST00000515860 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
LINC00500-201ENST00000515860 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
LINC00500-201ENST00000515860 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
LINC00500-201ENST00000515860 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
LINC00500-201ENST00000515860 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
LINC00500-201ENST00000515860 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
LINC00500-201ENST00000515860 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
LINC00500-201ENST00000515860 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00500-201ENST00000515860 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
LINC00500-201ENST00000515860 HAX1O00165 279 aa15.11■□□□□ 0.01
LINC00500-201ENST00000515860 PROM2Q8N271 834 aa15.06■□□□□ 0
LINC00500-201ENST00000515860 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
LINC00500-201ENST00000515860 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
LINC00500-201ENST00000515860 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
LINC00500-201ENST00000515860 CLEC11AQ9Y240 323 aa14.92□□□□□ -0.02
LINC00500-201ENST00000515860 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
LINC00500-201ENST00000515860 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
LINC00500-201ENST00000515860 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
LINC00500-201ENST00000515860 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
LINC00500-201ENST00000515860 EVX2Q03828 476 aa14.79□□□□□ -0.04
LINC00500-201ENST00000515860 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
LINC00500-201ENST00000515860 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
LINC00500-201ENST00000515860 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
LINC00500-201ENST00000515860 PRR29P0C7W0 189 aa14.63□□□□□ -0.07
LINC00500-201ENST00000515860 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
LINC00500-201ENST00000515860 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
LINC00500-201ENST00000515860 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
LINC00500-201ENST00000515860 GABBR2O75899 941 aa14.51□□□□□ -0.09
LINC00500-201ENST00000515860 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
LINC00500-201ENST00000515860 MIER1Q8N108 512 aa14.41□□□□□ -0.1
LINC00500-201ENST00000515860 KLHL34Q8N239 644 aa14.4□□□□□ -0.1
LINC00500-201ENST00000515860 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
LINC00500-201ENST00000515860 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
LINC00500-201ENST00000515860 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
LINC00500-201ENST00000515860 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
LINC00500-201ENST00000515860 LHX8Q68G74 356 aa14.31□□□□□ -0.12
LINC00500-201ENST00000515860 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
LINC00500-201ENST00000515860 CLCN6P51797 869 aa14.27□□□□□ -0.13
LINC00500-201ENST00000515860 PKD2Q13563 968 aa14.22□□□□□ -0.13
LINC00500-201ENST00000515860 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
LINC00500-201ENST00000515860 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
LINC00500-201ENST00000515860 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC00500-201ENST00000515860 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms