RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 CHIC1Q5VXU3 224 aa8.24□□□□□ -1.09
AC025539.1-201ENST00000515343 AEBP2Q6ZN18 517 aaPredicted RBP8.2□□□□□ -1.1
AC025539.1-201ENST00000515343 PHF23Q9BUL5 403 aaPredicted RBP7.22□□□□□ -1.25
AC025539.1-201ENST00000515343 SENP3Q9H4L4 574 aaPredicted RBP6.98□□□□□ -1.29
AC025539.1-201ENST00000515343 PLPPR3Q6T4P5 718 aa6.72□□□□□ -1.33
AC025539.1-201ENST00000515343 FOXD1Q16676 465 aa6.4□□□□□ -1.39
AC025539.1-201ENST00000515343 PPP6R1Q9UPN7 881 aa6.22□□□□□ -1.41
AC025539.1-201ENST00000515343 POTEDQ86YR6 584 aa6.19□□□□□ -1.42
AC025539.1-201ENST00000515343 ADRA2BP18089 450 aa6.16□□□□□ -1.42
AC025539.1-201ENST00000515343 MSH5O43196 834 aa6.06□□□□□ -1.44
AC025539.1-201ENST00000515343 DNAJC5BQ9UF47 199 aa5.97□□□□□ -1.45
AC025539.1-201ENST00000515343 PIAS4Q8N2W9 510 aaPredicted RBP5.96□□□□□ -1.45
AC025539.1-201ENST00000515343 PPP4R3CPQ6ZMV5 832 aa5.89□□□□□ -1.47
AC025539.1-201ENST00000515343 KCNA4P22459 653 aa5.84□□□□□ -1.47
AC025539.1-201ENST00000515343 NCBP3Q53F19 620 aaKnown RBP5.81□□□□□ -1.48
AC025539.1-201ENST00000515343 SCAF1Q9H7N4 1312 aaKnown RBP5.77□□□□□ -1.49
AC025539.1-201ENST00000515343 CNKSR2Q8WXI2 1034 aa5.77□□□□□ -1.49
AC025539.1-201ENST00000515343 NPM3O75607 178 aaKnown RBP5.7□□□□□ -1.5
AC025539.1-201ENST00000515343 RNF216Q9NWF9 866 aaPredicted RBP5.67□□□□□ -1.5
AC025539.1-201ENST00000515343 DMRT2Q9Y5R5 561 aa5.65□□□□□ -1.5
AC025539.1-201ENST00000515343 HOXD11P31277 338 aaPredicted RBP5.65□□□□□ -1.5
AC025539.1-201ENST00000515343 SLC4A1APQ9BWU0 796 aaKnown RBP5.59□□□□□ -1.51
AC025539.1-201ENST00000515343 MAPK8IP2Q13387 824 aaPredicted RBP5.52□□□□□ -1.53
AC025539.1-201ENST00000515343 CSRNP3Q8WYN3 585 aa5.52□□□□□ -1.53
AC025539.1-201ENST00000515343 ZBTB22O15209 634 aa5.44□□□□□ -1.54
AC025539.1-201ENST00000515343 FOXD4L1Q9NU39 408 aa5.43□□□□□ -1.54
AC025539.1-201ENST00000515343 ATXN8OSP0DMR3 200 aa5.41□□□□□ -1.54
AC025539.1-201ENST00000515343 SLC4A2P04920 1241 aa5.38□□□□□ -1.55
AC025539.1-201ENST00000515343 EHMT2Q96KQ7 1210 aa5.37□□□□□ -1.55
AC025539.1-201ENST00000515343 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
AC025539.1-201ENST00000515343 CACNB1Q02641 598 aaPredicted RBP5.22□□□□□ -1.57
AC025539.1-201ENST00000515343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.21□□□□□ -1.58
AC025539.1-201ENST00000515343 HNRNPUL2Q1KMD3 747 aaKnown RBP5.21□□□□□ -1.58
AC025539.1-201ENST00000515343 SAMD1Q6SPF0 538 aaPredicted RBP5.18□□□□□ -1.58
AC025539.1-201ENST00000515343 U3KPZ7 1027 aaPredicted RBP5.17□□□□□ -1.58
AC025539.1-201ENST00000515343 APLP2Q06481 763 aa5.15□□□□□ -1.59
AC025539.1-201ENST00000515343 RNF39Q9H2S5 420 aa5.1□□□□□ -1.59
AC025539.1-201ENST00000515343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.09□□□□□ -1.59
AC025539.1-201ENST00000515343 ATF5Q9Y2D1 282 aaPredicted RBP5.07□□□□□ -1.6
AC025539.1-201ENST00000515343 C1QBPQ07021 282 aaKnown RBP5.06□□□□□ -1.6
AC025539.1-201ENST00000515343 PROM2Q8N271 834 aa5.04□□□□□ -1.6
AC025539.1-201ENST00000515343 ZNF219Q9P2Y4 722 aaPredicted RBP5.01□□□□□ -1.61
AC025539.1-201ENST00000515343 DCAF8L1A6NGE4 600 aa4.95□□□□□ -1.62
AC025539.1-201ENST00000515343 ZBTB12Q9Y330 459 aaPredicted RBP4.93□□□□□ -1.62
AC025539.1-201ENST00000515343 MKRN4PQ13434 485 aaPredicted RBP4.91□□□□□ -1.62
AC025539.1-201ENST00000515343 DSG3P32926 999 aa4.86□□□□□ -1.63
AC025539.1-201ENST00000515343 SPINK5Q9NQ38 1064 aaPredicted RBP4.85□□□□□ -1.63
AC025539.1-201ENST00000515343 FBLN2P98095 1184 aa4.84□□□□□ -1.63
AC025539.1-201ENST00000515343 FKBP8Q14318 412 aa4.84□□□□□ -1.64
AC025539.1-201ENST00000515343 AMER1Q5JTC6 1135 aaPredicted RBP4.83□□□□□ -1.64
AC025539.1-201ENST00000515343 SSUH2Q9Y2M2 353 aa4.81□□□□□ -1.64
AC025539.1-201ENST00000515343 POTEHQ6S545 545 aa4.81□□□□□ -1.64
AC025539.1-201ENST00000515343 POLA2Q14181 598 aa4.8□□□□□ -1.64
AC025539.1-201ENST00000515343 FBXO3Q9UK99 471 aa4.8□□□□□ -1.64
AC025539.1-201ENST00000515343 SPDYE4A6NLX3 237 aa4.8□□□□□ -1.64
AC025539.1-201ENST00000515343 SPDYE2BA6NHP3 402 aa4.77□□□□□ -1.65
AC025539.1-201ENST00000515343 SPDYE6P0CI01 402 aa4.77□□□□□ -1.65
AC025539.1-201ENST00000515343 SPDYE2Q495Y8 402 aa4.77□□□□□ -1.65
AC025539.1-201ENST00000515343 CAPN15O75808 1086 aa4.76□□□□□ -1.65
AC025539.1-201ENST00000515343 RBAK-RBAKDNI3L0D1 243 aa4.74□□□□□ -1.65
AC025539.1-201ENST00000515343 TRHP20396 242 aaPredicted RBP4.73□□□□□ -1.65
AC025539.1-201ENST00000515343 STAG3Q9UJ98 1225 aa4.73□□□□□ -1.65
AC025539.1-201ENST00000515343 VASPP50552 380 aaPredicted RBP4.68□□□□□ -1.66
AC025539.1-201ENST00000515343 RTN4Q9NQC3 1192 aaKnown RBP4.66□□□□□ -1.66
AC025539.1-201ENST00000515343 AKT1S1Q96B36 256 aa4.64□□□□□ -1.67
AC025539.1-201ENST00000515343 ABCB7O75027 752 aa4.63□□□□□ -1.67
AC025539.1-201ENST00000515343 IFNLR1Q8IU57 520 aaPredicted RBP4.63□□□□□ -1.67
AC025539.1-201ENST00000515343 ZNF692Q9BU19 519 aaPredicted RBP4.62□□□□□ -1.67
AC025539.1-201ENST00000515343 DNAJC5Q9H3Z4 198 aa4.62□□□□□ -1.67
AC025539.1-201ENST00000515343 RBM42Q9BTD8 480 aaKnown RBP4.61□□□□□ -1.67
AC025539.1-201ENST00000515343 OSCARQ8IYS5 282 aa4.61□□□□□ -1.67
AC025539.1-201ENST00000515343 TRIM41Q8WV44 630 aa4.58□□□□□ -1.68
AC025539.1-201ENST00000515343 ZBTB47Q9UFB7 747 aaPredicted RBP4.57□□□□□ -1.68
AC025539.1-201ENST00000515343 SPOCK2Q92563 424 aa4.56□□□□□ -1.68
AC025539.1-201ENST00000515343 CHRM1P11229 460 aaPredicted RBP4.56□□□□□ -1.68
AC025539.1-201ENST00000515343 PKD2Q13563 968 aa4.56□□□□□ -1.68
AC025539.1-201ENST00000515343 PABPN1Q86U42 306 aaKnown RBP eCLIP4.56□□□□□ -1.68
AC025539.1-201ENST00000515343 MNX1P50219 401 aaPredicted RBP4.55□□□□□ -1.68
AC025539.1-201ENST00000515343 SGIP1Q9BQI5 828 aa4.54□□□□□ -1.68
AC025539.1-201ENST00000515343 SPDYE1Q8NFV5 336 aaPredicted RBP4.53□□□□□ -1.68
AC025539.1-201ENST00000515343 CREBZFQ9NS37 354 aa4.52□□□□□ -1.69
AC025539.1-201ENST00000515343 REM2Q8IYK8 340 aaPredicted RBP4.51□□□□□ -1.69
AC025539.1-201ENST00000515343 NUBP1P53384 320 aa4.51□□□□□ -1.69
AC025539.1-201ENST00000515343 SLC24A1O60721 1099 aa4.48□□□□□ -1.69
AC025539.1-201ENST00000515343 GSE1Q14687 1217 aa4.47□□□□□ -1.69
AC025539.1-201ENST00000515343 FXR2P51116 673 aaKnown RBP eCLIP4.46□□□□□ -1.69
AC025539.1-201ENST00000515343 BBXQ8WY36 941 aaPredicted RBP4.46□□□□□ -1.7
AC025539.1-201ENST00000515343 PLEKHG5O94827 1062 aa4.44□□□□□ -1.7
AC025539.1-201ENST00000515343 PITPNM1O00562 1244 aa4.43□□□□□ -1.7
AC025539.1-201ENST00000515343 SP7Q8TDD2 431 aaPredicted RBP4.43□□□□□ -1.7
AC025539.1-201ENST00000515343 PLCB2Q00722 1185 aa4.42□□□□□ -1.7
AC025539.1-201ENST00000515343 HS6ST3Q8IZP7 471 aa4.42□□□□□ -1.7
AC025539.1-201ENST00000515343 CHRDL2Q6WN34 429 aa4.41□□□□□ -1.7
AC025539.1-201ENST00000515343 MIER1Q8N108 512 aa4.41□□□□□ -1.7
AC025539.1-201ENST00000515343 NPM1P06748 294 aaKnown RBP eCLIP4.41□□□□□ -1.7
AC025539.1-201ENST00000515343 PLCD3Q8N3E9 789 aa4.4□□□□□ -1.7
AC025539.1-201ENST00000515343 TAOK2Q9UL54 1235 aa4.4□□□□□ -1.7
AC025539.1-201ENST00000515343 PRR29P0C7W0 189 aa4.4□□□□□ -1.71
AC025539.1-201ENST00000515343 ECM2O94769 699 aaPredicted RBP4.39□□□□□ -1.71
AC025539.1-201ENST00000515343 VSIG10Q8N0Z9 540 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms