RNA–Protein interactions for RNA: ENST00000515111.1

AC004054.1-201, humanhuman

TSL 3 BASIC

Gene AC004054.1, Length 270 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004054.1-201ENST00000515111 AEBP2Q6ZN18 517 aaPredicted RBP19.91■□□□□ 0.78
AC004054.1-201ENST00000515111 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
AC004054.1-201ENST00000515111 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
AC004054.1-201ENST00000515111 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
AC004054.1-201ENST00000515111 FOXD1Q16676 465 aa15.85■□□□□ 0.13
AC004054.1-201ENST00000515111 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
AC004054.1-201ENST00000515111 MSH5O43196 834 aa14.89□□□□□ -0.03
AC004054.1-201ENST00000515111 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
AC004054.1-201ENST00000515111 PPP6R1Q9UPN7 881 aa14.78□□□□□ -0.04
AC004054.1-201ENST00000515111 ADRA2BP18089 450 aa14.77□□□□□ -0.05
AC004054.1-201ENST00000515111 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
AC004054.1-201ENST00000515111 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
AC004054.1-201ENST00000515111 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
AC004054.1-201ENST00000515111 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
AC004054.1-201ENST00000515111 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
AC004054.1-201ENST00000515111 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
AC004054.1-201ENST00000515111 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
AC004054.1-201ENST00000515111 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
AC004054.1-201ENST00000515111 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
AC004054.1-201ENST00000515111 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
AC004054.1-201ENST00000515111 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
AC004054.1-201ENST00000515111 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
AC004054.1-201ENST00000515111 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
AC004054.1-201ENST00000515111 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
AC004054.1-201ENST00000515111 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
AC004054.1-201ENST00000515111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC004054.1-201ENST00000515111 KCNA4P22459 653 aa12.29□□□□□ -0.44
AC004054.1-201ENST00000515111 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
AC004054.1-201ENST00000515111 CAPN15O75808 1086 aa11.99□□□□□ -0.49
AC004054.1-201ENST00000515111 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
AC004054.1-201ENST00000515111 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
AC004054.1-201ENST00000515111 DSG3P32926 999 aa11.86□□□□□ -0.51
AC004054.1-201ENST00000515111 APLP2Q06481 763 aa11.86□□□□□ -0.51
AC004054.1-201ENST00000515111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
AC004054.1-201ENST00000515111 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
AC004054.1-201ENST00000515111 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
AC004054.1-201ENST00000515111 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
AC004054.1-201ENST00000515111 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
AC004054.1-201ENST00000515111 ABCB7O75027 752 aa11.7□□□□□ -0.54
AC004054.1-201ENST00000515111 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
AC004054.1-201ENST00000515111 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
AC004054.1-201ENST00000515111 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
AC004054.1-201ENST00000515111 POLA2Q14181 598 aa11.43□□□□□ -0.58
AC004054.1-201ENST00000515111 POTEHQ6S545 545 aa11.41□□□□□ -0.58
AC004054.1-201ENST00000515111 RBM42Q9BTD8 480 aaKnown RBP11.37□□□□□ -0.59
AC004054.1-201ENST00000515111 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
AC004054.1-201ENST00000515111 ZBTB22O15209 634 aa11.27□□□□□ -0.61
AC004054.1-201ENST00000515111 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
AC004054.1-201ENST00000515111 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
AC004054.1-201ENST00000515111 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
AC004054.1-201ENST00000515111 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
AC004054.1-201ENST00000515111 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
AC004054.1-201ENST00000515111 FBLN2P98095 1184 aa10.97□□□□□ -0.65
AC004054.1-201ENST00000515111 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
AC004054.1-201ENST00000515111 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
AC004054.1-201ENST00000515111 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
AC004054.1-201ENST00000515111 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
AC004054.1-201ENST00000515111 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
AC004054.1-201ENST00000515111 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
AC004054.1-201ENST00000515111 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
AC004054.1-201ENST00000515111 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
AC004054.1-201ENST00000515111 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC004054.1-201ENST00000515111 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
AC004054.1-201ENST00000515111 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
AC004054.1-201ENST00000515111 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
AC004054.1-201ENST00000515111 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
AC004054.1-201ENST00000515111 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
AC004054.1-201ENST00000515111 HAX1O00165 279 aa10.67□□□□□ -0.7
AC004054.1-201ENST00000515111 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
AC004054.1-201ENST00000515111 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
AC004054.1-201ENST00000515111 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
AC004054.1-201ENST00000515111 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
AC004054.1-201ENST00000515111 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
AC004054.1-201ENST00000515111 EVX2Q03828 476 aa10.45□□□□□ -0.74
AC004054.1-201ENST00000515111 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
AC004054.1-201ENST00000515111 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
AC004054.1-201ENST00000515111 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
AC004054.1-201ENST00000515111 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
AC004054.1-201ENST00000515111 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
AC004054.1-201ENST00000515111 GABBR2O75899 941 aa10.25□□□□□ -0.77
AC004054.1-201ENST00000515111 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
AC004054.1-201ENST00000515111 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
AC004054.1-201ENST00000515111 CLCN6P51797 869 aa10.1□□□□□ -0.79
AC004054.1-201ENST00000515111 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
AC004054.1-201ENST00000515111 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
AC004054.1-201ENST00000515111 NPM1P06748 294 aaKnown RBP eCLIP10.06□□□□□ -0.8
AC004054.1-201ENST00000515111 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
AC004054.1-201ENST00000515111 LHX8Q68G74 356 aa10.02□□□□□ -0.81
AC004054.1-201ENST00000515111 PROM2Q8N271 834 aa10.01□□□□□ -0.81
AC004054.1-201ENST00000515111 POTEIP0CG38 1075 aa10□□□□□ -0.81
AC004054.1-201ENST00000515111 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
AC004054.1-201ENST00000515111 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
AC004054.1-201ENST00000515111 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
AC004054.1-201ENST00000515111 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
AC004054.1-201ENST00000515111 MIER1Q8N108 512 aa9.87□□□□□ -0.83
AC004054.1-201ENST00000515111 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
AC004054.1-201ENST00000515111 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
AC004054.1-201ENST00000515111 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
AC004054.1-201ENST00000515111 FKBP8Q14318 412 aa9.8□□□□□ -0.84
AC004054.1-201ENST00000515111 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms