RNA–Protein interactions for RNA: ENST00000515100.1

LAMTOR3-203, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 3, humanhuman

TSL 1 (best)

Gene LAMTOR3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR3-203ENST00000515100 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
LAMTOR3-203ENST00000515100 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
LAMTOR3-203ENST00000515100 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
LAMTOR3-203ENST00000515100 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
LAMTOR3-203ENST00000515100 FOXD1Q16676 465 aa20.64■□□□□ 0.89
LAMTOR3-203ENST00000515100 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
LAMTOR3-203ENST00000515100 MSH5O43196 834 aa19.35■□□□□ 0.69
LAMTOR3-203ENST00000515100 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
LAMTOR3-203ENST00000515100 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
LAMTOR3-203ENST00000515100 ADRA2BP18089 450 aa19.18■□□□□ 0.66
LAMTOR3-203ENST00000515100 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
LAMTOR3-203ENST00000515100 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
LAMTOR3-203ENST00000515100 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
LAMTOR3-203ENST00000515100 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
LAMTOR3-203ENST00000515100 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
LAMTOR3-203ENST00000515100 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
LAMTOR3-203ENST00000515100 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
LAMTOR3-203ENST00000515100 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
LAMTOR3-203ENST00000515100 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
LAMTOR3-203ENST00000515100 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
LAMTOR3-203ENST00000515100 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
LAMTOR3-203ENST00000515100 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
LAMTOR3-203ENST00000515100 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
LAMTOR3-203ENST00000515100 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
LAMTOR3-203ENST00000515100 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
LAMTOR3-203ENST00000515100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
LAMTOR3-203ENST00000515100 KCNA4P22459 653 aa15.95■□□□□ 0.14
LAMTOR3-203ENST00000515100 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
LAMTOR3-203ENST00000515100 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
LAMTOR3-203ENST00000515100 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
LAMTOR3-203ENST00000515100 CAPN15O75808 1086 aa15.47■□□□□ 0.07
LAMTOR3-203ENST00000515100 DSG3P32926 999 aa15.43■□□□□ 0.06
LAMTOR3-203ENST00000515100 APLP2Q06481 763 aa15.34■□□□□ 0.05
LAMTOR3-203ENST00000515100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
LAMTOR3-203ENST00000515100 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
LAMTOR3-203ENST00000515100 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
LAMTOR3-203ENST00000515100 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
LAMTOR3-203ENST00000515100 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
LAMTOR3-203ENST00000515100 ABCB7O75027 752 aa15.1■□□□□ 0.01
LAMTOR3-203ENST00000515100 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
LAMTOR3-203ENST00000515100 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
LAMTOR3-203ENST00000515100 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
LAMTOR3-203ENST00000515100 POLA2Q14181 598 aa14.82□□□□□ -0.04
LAMTOR3-203ENST00000515100 POTEHQ6S545 545 aa14.81□□□□□ -0.04
LAMTOR3-203ENST00000515100 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
LAMTOR3-203ENST00000515100 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
LAMTOR3-203ENST00000515100 ZBTB22O15209 634 aa14.67□□□□□ -0.06
LAMTOR3-203ENST00000515100 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
LAMTOR3-203ENST00000515100 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
LAMTOR3-203ENST00000515100 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
LAMTOR3-203ENST00000515100 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
LAMTOR3-203ENST00000515100 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
LAMTOR3-203ENST00000515100 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
LAMTOR3-203ENST00000515100 FBLN2P98095 1184 aa14.17□□□□□ -0.14
LAMTOR3-203ENST00000515100 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
LAMTOR3-203ENST00000515100 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
LAMTOR3-203ENST00000515100 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
LAMTOR3-203ENST00000515100 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
LAMTOR3-203ENST00000515100 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
LAMTOR3-203ENST00000515100 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LAMTOR3-203ENST00000515100 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
LAMTOR3-203ENST00000515100 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
LAMTOR3-203ENST00000515100 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
LAMTOR3-203ENST00000515100 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
LAMTOR3-203ENST00000515100 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
LAMTOR3-203ENST00000515100 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
LAMTOR3-203ENST00000515100 HAX1O00165 279 aa13.78□□□□□ -0.2
LAMTOR3-203ENST00000515100 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
LAMTOR3-203ENST00000515100 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
LAMTOR3-203ENST00000515100 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
LAMTOR3-203ENST00000515100 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
LAMTOR3-203ENST00000515100 EVX2Q03828 476 aa13.63□□□□□ -0.23
LAMTOR3-203ENST00000515100 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
LAMTOR3-203ENST00000515100 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
LAMTOR3-203ENST00000515100 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
LAMTOR3-203ENST00000515100 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
LAMTOR3-203ENST00000515100 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
LAMTOR3-203ENST00000515100 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
LAMTOR3-203ENST00000515100 GABBR2O75899 941 aa13.34□□□□□ -0.27
LAMTOR3-203ENST00000515100 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
LAMTOR3-203ENST00000515100 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
LAMTOR3-203ENST00000515100 CLCN6P51797 869 aa13.19□□□□□ -0.3
LAMTOR3-203ENST00000515100 PROM2Q8N271 834 aa13.11□□□□□ -0.31
LAMTOR3-203ENST00000515100 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
LAMTOR3-203ENST00000515100 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
LAMTOR3-203ENST00000515100 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
LAMTOR3-203ENST00000515100 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
LAMTOR3-203ENST00000515100 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
LAMTOR3-203ENST00000515100 LHX8Q68G74 356 aa13.01□□□□□ -0.33
LAMTOR3-203ENST00000515100 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
LAMTOR3-203ENST00000515100 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
LAMTOR3-203ENST00000515100 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
LAMTOR3-203ENST00000515100 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
LAMTOR3-203ENST00000515100 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
LAMTOR3-203ENST00000515100 MIER1Q8N108 512 aa12.74□□□□□ -0.37
LAMTOR3-203ENST00000515100 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
LAMTOR3-203ENST00000515100 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
LAMTOR3-203ENST00000515100 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
LAMTOR3-203ENST00000515100 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
LAMTOR3-203ENST00000515100 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms