RNA–Protein interactions for RNA: ENST00000514479.1

PPARGC1A-212, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 324 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-212ENST00000514479 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
PPARGC1A-212ENST00000514479 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PPARGC1A-212ENST00000514479 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
PPARGC1A-212ENST00000514479 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
PPARGC1A-212ENST00000514479 FOXD1Q16676 465 aa13.9□□□□□ -0.18
PPARGC1A-212ENST00000514479 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
PPARGC1A-212ENST00000514479 MSH5O43196 834 aa13.03□□□□□ -0.32
PPARGC1A-212ENST00000514479 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
PPARGC1A-212ENST00000514479 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
PPARGC1A-212ENST00000514479 ADRA2BP18089 450 aa12.98□□□□□ -0.33
PPARGC1A-212ENST00000514479 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
PPARGC1A-212ENST00000514479 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
PPARGC1A-212ENST00000514479 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
PPARGC1A-212ENST00000514479 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
PPARGC1A-212ENST00000514479 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
PPARGC1A-212ENST00000514479 CNKSR2Q8WXI2 1034 aa11.49□□□□□ -0.57
PPARGC1A-212ENST00000514479 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
PPARGC1A-212ENST00000514479 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
PPARGC1A-212ENST00000514479 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
PPARGC1A-212ENST00000514479 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
PPARGC1A-212ENST00000514479 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
PPARGC1A-212ENST00000514479 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
PPARGC1A-212ENST00000514479 KCNA4P22459 653 aa10.92□□□□□ -0.66
PPARGC1A-212ENST00000514479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.676e-9■□□□□ 9.2
PPARGC1A-212ENST00000514479 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
PPARGC1A-212ENST00000514479 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
PPARGC1A-212ENST00000514479 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
PPARGC1A-212ENST00000514479 CAPN15O75808 1086 aa10.45□□□□□ -0.74
PPARGC1A-212ENST00000514479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 DSG3P32926 999 aa10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 APLP2Q06481 763 aa10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
PPARGC1A-212ENST00000514479 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
PPARGC1A-212ENST00000514479 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
PPARGC1A-212ENST00000514479 MYCNP04198 464 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-212ENST00000514479 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-212ENST00000514479 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
PPARGC1A-212ENST00000514479 ABCB7O75027 752 aa10.19□□□□□ -0.78
PPARGC1A-212ENST00000514479 POLA2Q14181 598 aa10.05□□□□□ -0.8
PPARGC1A-212ENST00000514479 ZBTB22O15209 634 aa10.04□□□□□ -0.8
PPARGC1A-212ENST00000514479 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
PPARGC1A-212ENST00000514479 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
PPARGC1A-212ENST00000514479 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
PPARGC1A-212ENST00000514479 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
PPARGC1A-212ENST00000514479 POTEHQ6S545 545 aa9.88□□□□□ -0.83
PPARGC1A-212ENST00000514479 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
PPARGC1A-212ENST00000514479 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
PPARGC1A-212ENST00000514479 CHRDL2Q6WN34 429 aa9.69□□□□□ -0.86
PPARGC1A-212ENST00000514479 FBLN2P98095 1184 aa9.65□□□□□ -0.86
PPARGC1A-212ENST00000514479 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
PPARGC1A-212ENST00000514479 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
PPARGC1A-212ENST00000514479 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 SPDYE2Q495Y8 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 MKRN4PQ13434 485 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-212ENST00000514479 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
PPARGC1A-212ENST00000514479 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
PPARGC1A-212ENST00000514479 PIP4P2Q8N4L2 257 aa9.47□□□□□ -0.89
PPARGC1A-212ENST00000514479 SSUH2Q9Y2M2 353 aa9.46□□□□□ -0.9
PPARGC1A-212ENST00000514479 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1A-212ENST00000514479 FXR2P51116 673 aaKnown RBP eCLIP9.44□□□□□ -0.9
PPARGC1A-212ENST00000514479 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
PPARGC1A-212ENST00000514479 CLEC11AQ9Y240 323 aa9.33□□□□□ -0.92
PPARGC1A-212ENST00000514479 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
PPARGC1A-212ENST00000514479 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
PPARGC1A-212ENST00000514479 HAX1O00165 279 aa9.27□□□□□ -0.93
PPARGC1A-212ENST00000514479 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-212ENST00000514479 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
PPARGC1A-212ENST00000514479 EVX2Q03828 476 aa9.15□□□□□ -0.94
PPARGC1A-212ENST00000514479 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
PPARGC1A-212ENST00000514479 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
PPARGC1A-212ENST00000514479 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
PPARGC1A-212ENST00000514479 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
PPARGC1A-212ENST00000514479 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
PPARGC1A-212ENST00000514479 CREBZFQ9NS37 354 aa9□□□□□ -0.97
PPARGC1A-212ENST00000514479 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
PPARGC1A-212ENST00000514479 GABBR2O75899 941 aa8.97□□□□□ -0.97
PPARGC1A-212ENST00000514479 PROM2Q8N271 834 aa8.97□□□□□ -0.97
PPARGC1A-212ENST00000514479 CLCN6P51797 869 aa8.92□□□□□ -0.98
PPARGC1A-212ENST00000514479 MNX1P50219 401 aaPredicted RBP8.86□□□□□ -0.99
PPARGC1A-212ENST00000514479 ZNF579Q8NAF0 562 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-212ENST00000514479 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
PPARGC1A-212ENST00000514479 ZRANB1Q9UGI0 708 aa8.85□□□□□ -0.99
PPARGC1A-212ENST00000514479 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
PPARGC1A-212ENST00000514479 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
PPARGC1A-212ENST00000514479 DCBLD2Q96PD2 775 aa8.73□□□□□ -1.01
PPARGC1A-212ENST00000514479 GALR2O43603 387 aaPredicted RBP8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 FKBP8Q14318 412 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 LHX8Q68G74 356 aa8.71□□□□□ -1.02
PPARGC1A-212ENST00000514479 MIER1Q8N108 512 aa8.7□□□□□ -1.02
PPARGC1A-212ENST00000514479 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
PPARGC1A-212ENST00000514479 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
PPARGC1A-212ENST00000514479 PLCD3Q8N3E9 789 aa8.64□□□□□ -1.03
PPARGC1A-212ENST00000514479 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms