RNA–Protein interactions for RNA: ENST00000514362.5

SEC31A-239, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-239ENST00000514362 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
SEC31A-239ENST00000514362 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
SEC31A-239ENST00000514362 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
SEC31A-239ENST00000514362 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
SEC31A-239ENST00000514362 FOXD1Q16676 465 aa20.83■□□□□ 0.93
SEC31A-239ENST00000514362 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
SEC31A-239ENST00000514362 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
SEC31A-239ENST00000514362 MSH5O43196 834 aa19.62■□□□□ 0.73
SEC31A-239ENST00000514362 PIAS4Q8N2W9 510 aaPredicted RBP19.33■□□□□ 0.68
SEC31A-239ENST00000514362 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
SEC31A-239ENST00000514362 ADRA2BP18089 450 aa19.09■□□□□ 0.65
SEC31A-239ENST00000514362 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
SEC31A-239ENST00000514362 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
SEC31A-239ENST00000514362 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
SEC31A-239ENST00000514362 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
SEC31A-239ENST00000514362 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
SEC31A-239ENST00000514362 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
SEC31A-239ENST00000514362 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
SEC31A-239ENST00000514362 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
SEC31A-239ENST00000514362 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
SEC31A-239ENST00000514362 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
SEC31A-239ENST00000514362 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SEC31A-239ENST00000514362 KCNA4P22459 653 aa16.51■□□□□ 0.23
SEC31A-239ENST00000514362 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
SEC31A-239ENST00000514362 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
SEC31A-239ENST00000514362 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
SEC31A-239ENST00000514362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.151e-34■□□□□ 9.2
SEC31A-239ENST00000514362 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
SEC31A-239ENST00000514362 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
SEC31A-239ENST00000514362 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
SEC31A-239ENST00000514362 DSG3P32926 999 aa15.53■□□□□ 0.08
SEC31A-239ENST00000514362 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
SEC31A-239ENST00000514362 CAPN15O75808 1086 aa15.46■□□□□ 0.07
SEC31A-239ENST00000514362 POTEHQ6S545 545 aa15.38■□□□□ 0.05
SEC31A-239ENST00000514362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
SEC31A-239ENST00000514362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
SEC31A-239ENST00000514362 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
SEC31A-239ENST00000514362 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
SEC31A-239ENST00000514362 APLP2Q06481 763 aa15.25■□□□□ 0.03
SEC31A-239ENST00000514362 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
SEC31A-239ENST00000514362 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
SEC31A-239ENST00000514362 ZBTB22O15209 634 aa15.13■□□□□ 0.01
SEC31A-239ENST00000514362 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
SEC31A-239ENST00000514362 ABCB7O75027 752 aa15.07■□□□□ 0
SEC31A-239ENST00000514362 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
SEC31A-239ENST00000514362 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
SEC31A-239ENST00000514362 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
SEC31A-239ENST00000514362 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
SEC31A-239ENST00000514362 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
SEC31A-239ENST00000514362 POLA2Q14181 598 aa14.71□□□□□ -0.05
SEC31A-239ENST00000514362 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
SEC31A-239ENST00000514362 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
SEC31A-239ENST00000514362 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
SEC31A-239ENST00000514362 FBLN2P98095 1184 aa14.33□□□□□ -0.12
SEC31A-239ENST00000514362 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
SEC31A-239ENST00000514362 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
SEC31A-239ENST00000514362 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
SEC31A-239ENST00000514362 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
SEC31A-239ENST00000514362 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
SEC31A-239ENST00000514362 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
SEC31A-239ENST00000514362 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
SEC31A-239ENST00000514362 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
SEC31A-239ENST00000514362 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
SEC31A-239ENST00000514362 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
SEC31A-239ENST00000514362 HAX1O00165 279 aa13.99□□□□□ -0.17
SEC31A-239ENST00000514362 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
SEC31A-239ENST00000514362 EVX2Q03828 476 aa13.85□□□□□ -0.19
SEC31A-239ENST00000514362 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
SEC31A-239ENST00000514362 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
SEC31A-239ENST00000514362 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEC31A-239ENST00000514362 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
SEC31A-239ENST00000514362 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
SEC31A-239ENST00000514362 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
SEC31A-239ENST00000514362 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
SEC31A-239ENST00000514362 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
SEC31A-239ENST00000514362 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
SEC31A-239ENST00000514362 GABBR2O75899 941 aa13.51□□□□□ -0.25
SEC31A-239ENST00000514362 FKBP8Q14318 412 aa13.51□□□□□ -0.25
SEC31A-239ENST00000514362 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
SEC31A-239ENST00000514362 PROM2Q8N271 834 aa13.41□□□□□ -0.26
SEC31A-239ENST00000514362 LHX8Q68G74 356 aa13.36□□□□□ -0.27
SEC31A-239ENST00000514362 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
SEC31A-239ENST00000514362 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
SEC31A-239ENST00000514362 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
SEC31A-239ENST00000514362 CLCN6P51797 869 aa13.24□□□□□ -0.29
SEC31A-239ENST00000514362 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
SEC31A-239ENST00000514362 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
SEC31A-239ENST00000514362 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
SEC31A-239ENST00000514362 MIER1Q8N108 512 aa13.14□□□□□ -0.31
SEC31A-239ENST00000514362 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
SEC31A-239ENST00000514362 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
SEC31A-239ENST00000514362 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
SEC31A-239ENST00000514362 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
SEC31A-239ENST00000514362 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
SEC31A-239ENST00000514362 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
SEC31A-239ENST00000514362 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
SEC31A-239ENST00000514362 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
SEC31A-239ENST00000514362 GALR2O43603 387 aaPredicted RBP12.92□□□□□ -0.34
SEC31A-239ENST00000514362 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
SEC31A-239ENST00000514362 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms