RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
SNX2-212ENST00000514030 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
SNX2-212ENST00000514030 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
SNX2-212ENST00000514030 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
SNX2-212ENST00000514030 FOXD1Q16676 465 aa23.01■■□□□ 1.27
SNX2-212ENST00000514030 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
SNX2-212ENST00000514030 MSH5O43196 834 aa21.68■■□□□ 1.06
SNX2-212ENST00000514030 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
SNX2-212ENST00000514030 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
SNX2-212ENST00000514030 ADRA2BP18089 450 aa21.45■■□□□ 1.02
SNX2-212ENST00000514030 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
SNX2-212ENST00000514030 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
SNX2-212ENST00000514030 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
SNX2-212ENST00000514030 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
SNX2-212ENST00000514030 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
SNX2-212ENST00000514030 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
SNX2-212ENST00000514030 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
SNX2-212ENST00000514030 HOXD11P31277 338 aaPredicted RBP18.9■□□□□ 0.62
SNX2-212ENST00000514030 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
SNX2-212ENST00000514030 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
SNX2-212ENST00000514030 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
SNX2-212ENST00000514030 RNF39Q9H2S5 420 aa18.41■□□□□ 0.54
SNX2-212ENST00000514030 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
SNX2-212ENST00000514030 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
SNX2-212ENST00000514030 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
SNX2-212ENST00000514030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.491e-7■□□□□ 10.1
SNX2-212ENST00000514030 KCNA4P22459 653 aa17.94■□□□□ 0.46
SNX2-212ENST00000514030 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
SNX2-212ENST00000514030 CAPN15O75808 1086 aa17.42■□□□□ 0.38
SNX2-212ENST00000514030 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
SNX2-212ENST00000514030 APLP2Q06481 763 aa17.35■□□□□ 0.37
SNX2-212ENST00000514030 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
SNX2-212ENST00000514030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
SNX2-212ENST00000514030 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
SNX2-212ENST00000514030 DSG3P32926 999 aa17.24■□□□□ 0.35
SNX2-212ENST00000514030 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
SNX2-212ENST00000514030 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
SNX2-212ENST00000514030 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
SNX2-212ENST00000514030 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
SNX2-212ENST00000514030 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
SNX2-212ENST00000514030 ABCB7O75027 752 aa16.97■□□□□ 0.31
SNX2-212ENST00000514030 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
SNX2-212ENST00000514030 POLA2Q14181 598 aa16.64■□□□□ 0.25
SNX2-212ENST00000514030 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
SNX2-212ENST00000514030 POTEHQ6S545 545 aa16.51■□□□□ 0.23
SNX2-212ENST00000514030 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
SNX2-212ENST00000514030 ZBTB22O15209 634 aa16.43■□□□□ 0.22
SNX2-212ENST00000514030 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
SNX2-212ENST00000514030 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
SNX2-212ENST00000514030 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
SNX2-212ENST00000514030 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
SNX2-212ENST00000514030 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
SNX2-212ENST00000514030 FBLN2P98095 1184 aa16.02■□□□□ 0.16
SNX2-212ENST00000514030 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
SNX2-212ENST00000514030 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
SNX2-212ENST00000514030 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
SNX2-212ENST00000514030 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
SNX2-212ENST00000514030 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
SNX2-212ENST00000514030 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
SNX2-212ENST00000514030 MKRN4PQ13434 485 aaPredicted RBP15.71■□□□□ 0.11
SNX2-212ENST00000514030 PIP4P2Q8N4L2 257 aa15.71■□□□□ 0.11
SNX2-212ENST00000514030 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
SNX2-212ENST00000514030 FXR2P51116 673 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNX2-212ENST00000514030 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
SNX2-212ENST00000514030 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
SNX2-212ENST00000514030 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
SNX2-212ENST00000514030 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
SNX2-212ENST00000514030 SP7Q8TDD2 431 aaPredicted RBP15.5■□□□□ 0.07
SNX2-212ENST00000514030 HAX1O00165 279 aa15.48■□□□□ 0.07
SNX2-212ENST00000514030 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNX2-212ENST00000514030 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
SNX2-212ENST00000514030 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
SNX2-212ENST00000514030 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
SNX2-212ENST00000514030 EVX2Q03828 476 aa15.13■□□□□ 0.01
SNX2-212ENST00000514030 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
SNX2-212ENST00000514030 SPDYE4A6NLX3 237 aa15.09■□□□□ 0.01
SNX2-212ENST00000514030 STAG3Q9UJ98 1225 aa15.08■□□□□ 0
SNX2-212ENST00000514030 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
SNX2-212ENST00000514030 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
SNX2-212ENST00000514030 GABBR2O75899 941 aa14.89□□□□□ -0.03
SNX2-212ENST00000514030 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
SNX2-212ENST00000514030 CLCN6P51797 869 aa14.8□□□□□ -0.04
SNX2-212ENST00000514030 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
SNX2-212ENST00000514030 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
SNX2-212ENST00000514030 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNX2-212ENST00000514030 ZNF579Q8NAF0 562 aaKnown RBP14.68□□□□□ -0.06
SNX2-212ENST00000514030 PROM2Q8N271 834 aa14.65□□□□□ -0.06
SNX2-212ENST00000514030 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
SNX2-212ENST00000514030 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
SNX2-212ENST00000514030 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
SNX2-212ENST00000514030 LHX8Q68G74 356 aa14.53□□□□□ -0.08
SNX2-212ENST00000514030 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
SNX2-212ENST00000514030 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
SNX2-212ENST00000514030 GALR2O43603 387 aaPredicted RBP14.45□□□□□ -0.1
SNX2-212ENST00000514030 MIER1Q8N108 512 aa14.41□□□□□ -0.1
SNX2-212ENST00000514030 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
SNX2-212ENST00000514030 FKBP8Q14318 412 aa14.35□□□□□ -0.11
SNX2-212ENST00000514030 PLCD3Q8N3E9 789 aa14.35□□□□□ -0.11
SNX2-212ENST00000514030 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SNX2-212ENST00000514030 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms