RNA–Protein interactions for RNA: ENST00000513152.1

PRKAA1-209, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 2

Gene PRKAA1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-209ENST00000513152 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
PRKAA1-209ENST00000513152 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
PRKAA1-209ENST00000513152 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
PRKAA1-209ENST00000513152 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
PRKAA1-209ENST00000513152 FOXD1Q16676 465 aa21.02■□□□□ 0.96
PRKAA1-209ENST00000513152 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
PRKAA1-209ENST00000513152 MSH5O43196 834 aa19.81■□□□□ 0.76
PRKAA1-209ENST00000513152 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
PRKAA1-209ENST00000513152 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
PRKAA1-209ENST00000513152 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
PRKAA1-209ENST00000513152 ADRA2BP18089 450 aa19.64■□□□□ 0.73
PRKAA1-209ENST00000513152 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
PRKAA1-209ENST00000513152 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
PRKAA1-209ENST00000513152 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
PRKAA1-209ENST00000513152 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
PRKAA1-209ENST00000513152 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
PRKAA1-209ENST00000513152 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
PRKAA1-209ENST00000513152 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
PRKAA1-209ENST00000513152 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
PRKAA1-209ENST00000513152 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
PRKAA1-209ENST00000513152 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
PRKAA1-209ENST00000513152 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
PRKAA1-209ENST00000513152 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
PRKAA1-209ENST00000513152 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
PRKAA1-209ENST00000513152 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
PRKAA1-209ENST00000513152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRKAA1-209ENST00000513152 KCNA4P22459 653 aa16.47■□□□□ 0.23
PRKAA1-209ENST00000513152 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
PRKAA1-209ENST00000513152 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
PRKAA1-209ENST00000513152 CAPN15O75808 1086 aa15.88■□□□□ 0.13
PRKAA1-209ENST00000513152 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
PRKAA1-209ENST00000513152 DSG3P32926 999 aa15.73■□□□□ 0.11
PRKAA1-209ENST00000513152 APLP2Q06481 763 aa15.73■□□□□ 0.11
PRKAA1-209ENST00000513152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
PRKAA1-209ENST00000513152 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
PRKAA1-209ENST00000513152 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
PRKAA1-209ENST00000513152 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
PRKAA1-209ENST00000513152 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
PRKAA1-209ENST00000513152 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
PRKAA1-209ENST00000513152 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
PRKAA1-209ENST00000513152 ABCB7O75027 752 aa15.5■□□□□ 0.07
PRKAA1-209ENST00000513152 POTEHQ6S545 545 aa15.44■□□□□ 0.06
PRKAA1-209ENST00000513152 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
PRKAA1-209ENST00000513152 POLA2Q14181 598 aa15.21■□□□□ 0.03
PRKAA1-209ENST00000513152 ZBTB22O15209 634 aa15.12■□□□□ 0.01
PRKAA1-209ENST00000513152 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
PRKAA1-209ENST00000513152 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
PRKAA1-209ENST00000513152 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
PRKAA1-209ENST00000513152 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
PRKAA1-209ENST00000513152 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
PRKAA1-209ENST00000513152 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
PRKAA1-209ENST00000513152 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
PRKAA1-209ENST00000513152 FBLN2P98095 1184 aa14.59□□□□□ -0.07
PRKAA1-209ENST00000513152 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
PRKAA1-209ENST00000513152 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
PRKAA1-209ENST00000513152 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
PRKAA1-209ENST00000513152 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
PRKAA1-209ENST00000513152 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
PRKAA1-209ENST00000513152 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
PRKAA1-209ENST00000513152 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
PRKAA1-209ENST00000513152 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
PRKAA1-209ENST00000513152 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
PRKAA1-209ENST00000513152 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
PRKAA1-209ENST00000513152 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
PRKAA1-209ENST00000513152 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
PRKAA1-209ENST00000513152 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
PRKAA1-209ENST00000513152 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
PRKAA1-209ENST00000513152 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
PRKAA1-209ENST00000513152 HAX1O00165 279 aa14.13□□□□□ -0.15
PRKAA1-209ENST00000513152 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRKAA1-209ENST00000513152 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
PRKAA1-209ENST00000513152 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
PRKAA1-209ENST00000513152 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
PRKAA1-209ENST00000513152 EVX2Q03828 476 aa13.87□□□□□ -0.19
PRKAA1-209ENST00000513152 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
PRKAA1-209ENST00000513152 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
PRKAA1-209ENST00000513152 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
PRKAA1-209ENST00000513152 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
PRKAA1-209ENST00000513152 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
PRKAA1-209ENST00000513152 GABBR2O75899 941 aa13.58□□□□□ -0.24
PRKAA1-209ENST00000513152 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
PRKAA1-209ENST00000513152 CLCN6P51797 869 aa13.49□□□□□ -0.25
PRKAA1-209ENST00000513152 LHX8Q68G74 356 aa13.44□□□□□ -0.26
PRKAA1-209ENST00000513152 PROM2Q8N271 834 aa13.42□□□□□ -0.26
PRKAA1-209ENST00000513152 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
PRKAA1-209ENST00000513152 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRKAA1-209ENST00000513152 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
PRKAA1-209ENST00000513152 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
PRKAA1-209ENST00000513152 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
PRKAA1-209ENST00000513152 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
PRKAA1-209ENST00000513152 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
PRKAA1-209ENST00000513152 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
PRKAA1-209ENST00000513152 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
PRKAA1-209ENST00000513152 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
PRKAA1-209ENST00000513152 MIER1Q8N108 512 aa13.18□□□□□ -0.3
PRKAA1-209ENST00000513152 FKBP8Q14318 412 aa13.16□□□□□ -0.3
PRKAA1-209ENST00000513152 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
PRKAA1-209ENST00000513152 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
PRKAA1-209ENST00000513152 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
PRKAA1-209ENST00000513152 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms