RNA–Protein interactions for RNA: ENST00000512900.1

AC008549.1-201, humanhuman

BASIC

Gene AC008549.1, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008549.1-201ENST00000512900 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
AC008549.1-201ENST00000512900 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
AC008549.1-201ENST00000512900 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
AC008549.1-201ENST00000512900 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
AC008549.1-201ENST00000512900 FOXD1Q16676 465 aa24.02■■□□□ 1.44
AC008549.1-201ENST00000512900 MSH5O43196 834 aa22.67■■□□□ 1.22
AC008549.1-201ENST00000512900 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
AC008549.1-201ENST00000512900 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
AC008549.1-201ENST00000512900 PIAS4Q8N2W9 510 aaPredicted RBP22.36■■□□□ 1.17
AC008549.1-201ENST00000512900 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
AC008549.1-201ENST00000512900 ADRA2BP18089 450 aa22.07■■□□□ 1.12
AC008549.1-201ENST00000512900 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
AC008549.1-201ENST00000512900 MAPK8IP2Q13387 824 aaPredicted RBP20.35■□□□□ 0.85
AC008549.1-201ENST00000512900 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
AC008549.1-201ENST00000512900 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
AC008549.1-201ENST00000512900 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
AC008549.1-201ENST00000512900 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
AC008549.1-201ENST00000512900 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
AC008549.1-201ENST00000512900 CNKSR2Q8WXI2 1034 aa19.35■□□□□ 0.69
AC008549.1-201ENST00000512900 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
AC008549.1-201ENST00000512900 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
AC008549.1-201ENST00000512900 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
AC008549.1-201ENST00000512900 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
AC008549.1-201ENST00000512900 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
AC008549.1-201ENST00000512900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
AC008549.1-201ENST00000512900 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
AC008549.1-201ENST00000512900 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
AC008549.1-201ENST00000512900 DSG3P32926 999 aa17.94■□□□□ 0.46
AC008549.1-201ENST00000512900 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
AC008549.1-201ENST00000512900 CAPN15O75808 1086 aa17.91■□□□□ 0.46
AC008549.1-201ENST00000512900 KCNA4P22459 653 aa17.81■□□□□ 0.44
AC008549.1-201ENST00000512900 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
AC008549.1-201ENST00000512900 POTEHQ6S545 545 aa17.68■□□□□ 0.42
AC008549.1-201ENST00000512900 APLP2Q06481 763 aa17.65■□□□□ 0.42
AC008549.1-201ENST00000512900 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
AC008549.1-201ENST00000512900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
AC008549.1-201ENST00000512900 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
AC008549.1-201ENST00000512900 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
AC008549.1-201ENST00000512900 ABCB7O75027 752 aa17.44■□□□□ 0.38
AC008549.1-201ENST00000512900 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
AC008549.1-201ENST00000512900 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
AC008549.1-201ENST00000512900 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
AC008549.1-201ENST00000512900 POLA2Q14181 598 aa17■□□□□ 0.31
AC008549.1-201ENST00000512900 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
AC008549.1-201ENST00000512900 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
AC008549.1-201ENST00000512900 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
AC008549.1-201ENST00000512900 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
AC008549.1-201ENST00000512900 AKT1S1Q96B36 256 aa16.69■□□□□ 0.26
AC008549.1-201ENST00000512900 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
AC008549.1-201ENST00000512900 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
AC008549.1-201ENST00000512900 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
AC008549.1-201ENST00000512900 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
AC008549.1-201ENST00000512900 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
AC008549.1-201ENST00000512900 ZBTB22O15209 634 aa16.38■□□□□ 0.21
AC008549.1-201ENST00000512900 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
AC008549.1-201ENST00000512900 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
AC008549.1-201ENST00000512900 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
AC008549.1-201ENST00000512900 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
AC008549.1-201ENST00000512900 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
AC008549.1-201ENST00000512900 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
AC008549.1-201ENST00000512900 HAX1O00165 279 aa16.15■□□□□ 0.18
AC008549.1-201ENST00000512900 FBLN2P98095 1184 aa16.12■□□□□ 0.17
AC008549.1-201ENST00000512900 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
AC008549.1-201ENST00000512900 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
AC008549.1-201ENST00000512900 EVX2Q03828 476 aa15.92■□□□□ 0.14
AC008549.1-201ENST00000512900 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
AC008549.1-201ENST00000512900 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
AC008549.1-201ENST00000512900 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
AC008549.1-201ENST00000512900 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
AC008549.1-201ENST00000512900 C19orf67A6NJJ6 358 aa15.77■□□□□ 0.12
AC008549.1-201ENST00000512900 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
AC008549.1-201ENST00000512900 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
AC008549.1-201ENST00000512900 GABBR2O75899 941 aa15.57■□□□□ 0.08
AC008549.1-201ENST00000512900 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
AC008549.1-201ENST00000512900 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
AC008549.1-201ENST00000512900 LHX8Q68G74 356 aa15.38■□□□□ 0.05
AC008549.1-201ENST00000512900 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
AC008549.1-201ENST00000512900 CLCN6P51797 869 aa15.33■□□□□ 0.04
AC008549.1-201ENST00000512900 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
AC008549.1-201ENST00000512900 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
AC008549.1-201ENST00000512900 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
AC008549.1-201ENST00000512900 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
AC008549.1-201ENST00000512900 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
AC008549.1-201ENST00000512900 DCBLD2Q96PD2 775 aa15.07■□□□□ 0
AC008549.1-201ENST00000512900 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
AC008549.1-201ENST00000512900 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
AC008549.1-201ENST00000512900 GALR2O43603 387 aaPredicted RBP14.93□□□□□ -0.02
AC008549.1-201ENST00000512900 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
AC008549.1-201ENST00000512900 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
AC008549.1-201ENST00000512900 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
AC008549.1-201ENST00000512900 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
AC008549.1-201ENST00000512900 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
AC008549.1-201ENST00000512900 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
AC008549.1-201ENST00000512900 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
AC008549.1-201ENST00000512900 PROM2Q8N271 834 aa14.69□□□□□ -0.06
AC008549.1-201ENST00000512900 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
AC008549.1-201ENST00000512900 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
AC008549.1-201ENST00000512900 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
AC008549.1-201ENST00000512900 ATMINO43313 823 aaPredicted RBP14.59□□□□□ -0.07
AC008549.1-201ENST00000512900 C7P10643 843 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms