RNA–Protein interactions for RNA: ENST00000511940.1

AC016550.2-202, humanhuman

TSL 2 BASIC

Gene AC016550.2, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.2-202ENST00000511940 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
AC016550.2-202ENST00000511940 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
AC016550.2-202ENST00000511940 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
AC016550.2-202ENST00000511940 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
AC016550.2-202ENST00000511940 FOXD1Q16676 465 aa21.08■□□□□ 0.97
AC016550.2-202ENST00000511940 MSH5O43196 834 aa19.77■□□□□ 0.76
AC016550.2-202ENST00000511940 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
AC016550.2-202ENST00000511940 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
AC016550.2-202ENST00000511940 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
AC016550.2-202ENST00000511940 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
AC016550.2-202ENST00000511940 ADRA2BP18089 450 aa19.46■□□□□ 0.71
AC016550.2-202ENST00000511940 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
AC016550.2-202ENST00000511940 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
AC016550.2-202ENST00000511940 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
AC016550.2-202ENST00000511940 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
AC016550.2-202ENST00000511940 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
AC016550.2-202ENST00000511940 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
AC016550.2-202ENST00000511940 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
AC016550.2-202ENST00000511940 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
AC016550.2-202ENST00000511940 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
AC016550.2-202ENST00000511940 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
AC016550.2-202ENST00000511940 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
AC016550.2-202ENST00000511940 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
AC016550.2-202ENST00000511940 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
AC016550.2-202ENST00000511940 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
AC016550.2-202ENST00000511940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC016550.2-202ENST00000511940 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
AC016550.2-202ENST00000511940 KCNA4P22459 653 aa15.87■□□□□ 0.13
AC016550.2-202ENST00000511940 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
AC016550.2-202ENST00000511940 DSG3P32926 999 aa15.74■□□□□ 0.11
AC016550.2-202ENST00000511940 CAPN15O75808 1086 aa15.72■□□□□ 0.11
AC016550.2-202ENST00000511940 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
AC016550.2-202ENST00000511940 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
AC016550.2-202ENST00000511940 APLP2Q06481 763 aa15.42■□□□□ 0.06
AC016550.2-202ENST00000511940 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
AC016550.2-202ENST00000511940 ABCB7O75027 752 aa15.37■□□□□ 0.05
AC016550.2-202ENST00000511940 POTEHQ6S545 545 aa15.37■□□□□ 0.05
AC016550.2-202ENST00000511940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
AC016550.2-202ENST00000511940 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
AC016550.2-202ENST00000511940 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
AC016550.2-202ENST00000511940 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
AC016550.2-202ENST00000511940 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
AC016550.2-202ENST00000511940 POLA2Q14181 598 aa14.97□□□□□ -0.01
AC016550.2-202ENST00000511940 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
AC016550.2-202ENST00000511940 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
AC016550.2-202ENST00000511940 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
AC016550.2-202ENST00000511940 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
AC016550.2-202ENST00000511940 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
AC016550.2-202ENST00000511940 ZBTB22O15209 634 aa14.62□□□□□ -0.07
AC016550.2-202ENST00000511940 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
AC016550.2-202ENST00000511940 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
AC016550.2-202ENST00000511940 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
AC016550.2-202ENST00000511940 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
AC016550.2-202ENST00000511940 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
AC016550.2-202ENST00000511940 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
AC016550.2-202ENST00000511940 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
AC016550.2-202ENST00000511940 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
AC016550.2-202ENST00000511940 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
AC016550.2-202ENST00000511940 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
AC016550.2-202ENST00000511940 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
AC016550.2-202ENST00000511940 FBLN2P98095 1184 aa14.18□□□□□ -0.14
AC016550.2-202ENST00000511940 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
AC016550.2-202ENST00000511940 HAX1O00165 279 aa14.11□□□□□ -0.15
AC016550.2-202ENST00000511940 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
AC016550.2-202ENST00000511940 EVX2Q03828 476 aa14□□□□□ -0.17
AC016550.2-202ENST00000511940 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
AC016550.2-202ENST00000511940 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
AC016550.2-202ENST00000511940 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
AC016550.2-202ENST00000511940 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
AC016550.2-202ENST00000511940 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
AC016550.2-202ENST00000511940 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC016550.2-202ENST00000511940 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
AC016550.2-202ENST00000511940 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
AC016550.2-202ENST00000511940 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
AC016550.2-202ENST00000511940 GABBR2O75899 941 aa13.64□□□□□ -0.23
AC016550.2-202ENST00000511940 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
AC016550.2-202ENST00000511940 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
AC016550.2-202ENST00000511940 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
AC016550.2-202ENST00000511940 LHX8Q68G74 356 aa13.4□□□□□ -0.26
AC016550.2-202ENST00000511940 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
AC016550.2-202ENST00000511940 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
AC016550.2-202ENST00000511940 CLCN6P51797 869 aa13.31□□□□□ -0.28
AC016550.2-202ENST00000511940 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
AC016550.2-202ENST00000511940 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
AC016550.2-202ENST00000511940 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
AC016550.2-202ENST00000511940 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
AC016550.2-202ENST00000511940 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
AC016550.2-202ENST00000511940 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
AC016550.2-202ENST00000511940 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
AC016550.2-202ENST00000511940 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
AC016550.2-202ENST00000511940 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
AC016550.2-202ENST00000511940 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC016550.2-202ENST00000511940 PROM2Q8N271 834 aa13.03□□□□□ -0.32
AC016550.2-202ENST00000511940 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
AC016550.2-202ENST00000511940 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
AC016550.2-202ENST00000511940 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
AC016550.2-202ENST00000511940 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
AC016550.2-202ENST00000511940 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
AC016550.2-202ENST00000511940 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
AC016550.2-202ENST00000511940 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms