RNA–Protein interactions for RNA: ENST00000511219.1

AC004704.1-201, humanhuman

TSL 3 BASIC

Gene AC004704.1, Length 583 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004704.1-201ENST00000511219 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
AC004704.1-201ENST00000511219 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
AC004704.1-201ENST00000511219 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
AC004704.1-201ENST00000511219 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
AC004704.1-201ENST00000511219 FOXD1Q16676 465 aa20.14■□□□□ 0.81
AC004704.1-201ENST00000511219 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
AC004704.1-201ENST00000511219 MSH5O43196 834 aa18.9■□□□□ 0.62
AC004704.1-201ENST00000511219 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
AC004704.1-201ENST00000511219 PIAS4Q8N2W9 510 aaPredicted RBP18.67■□□□□ 0.58
AC004704.1-201ENST00000511219 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
AC004704.1-201ENST00000511219 ADRA2BP18089 450 aa18.5■□□□□ 0.55
AC004704.1-201ENST00000511219 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
AC004704.1-201ENST00000511219 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
AC004704.1-201ENST00000511219 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
AC004704.1-201ENST00000511219 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
AC004704.1-201ENST00000511219 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
AC004704.1-201ENST00000511219 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
AC004704.1-201ENST00000511219 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
AC004704.1-201ENST00000511219 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
AC004704.1-201ENST00000511219 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
AC004704.1-201ENST00000511219 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
AC004704.1-201ENST00000511219 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
AC004704.1-201ENST00000511219 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
AC004704.1-201ENST00000511219 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
AC004704.1-201ENST00000511219 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
AC004704.1-201ENST00000511219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
AC004704.1-201ENST00000511219 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
AC004704.1-201ENST00000511219 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
AC004704.1-201ENST00000511219 DSG3P32926 999 aa15.02■□□□□ -0
AC004704.1-201ENST00000511219 CAPN15O75808 1086 aa14.93□□□□□ -0.02
AC004704.1-201ENST00000511219 KCNA4P22459 653 aa14.92□□□□□ -0.02
AC004704.1-201ENST00000511219 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
AC004704.1-201ENST00000511219 POTEHQ6S545 545 aa14.79□□□□□ -0.04
AC004704.1-201ENST00000511219 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
AC004704.1-201ENST00000511219 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
AC004704.1-201ENST00000511219 APLP2Q06481 763 aa14.62□□□□□ -0.07
AC004704.1-201ENST00000511219 ABCB7O75027 752 aa14.59□□□□□ -0.07
AC004704.1-201ENST00000511219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
AC004704.1-201ENST00000511219 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
AC004704.1-201ENST00000511219 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
AC004704.1-201ENST00000511219 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
AC004704.1-201ENST00000511219 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
AC004704.1-201ENST00000511219 POLA2Q14181 598 aa14.21□□□□□ -0.13
AC004704.1-201ENST00000511219 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
AC004704.1-201ENST00000511219 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
AC004704.1-201ENST00000511219 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
AC004704.1-201ENST00000511219 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
AC004704.1-201ENST00000511219 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
AC004704.1-201ENST00000511219 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
AC004704.1-201ENST00000511219 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
AC004704.1-201ENST00000511219 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
AC004704.1-201ENST00000511219 ZBTB22O15209 634 aa13.77□□□□□ -0.21
AC004704.1-201ENST00000511219 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
AC004704.1-201ENST00000511219 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
AC004704.1-201ENST00000511219 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
AC004704.1-201ENST00000511219 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
AC004704.1-201ENST00000511219 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC004704.1-201ENST00000511219 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
AC004704.1-201ENST00000511219 HAX1O00165 279 aa13.47□□□□□ -0.25
AC004704.1-201ENST00000511219 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
AC004704.1-201ENST00000511219 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
AC004704.1-201ENST00000511219 FBLN2P98095 1184 aa13.4□□□□□ -0.26
AC004704.1-201ENST00000511219 EVX2Q03828 476 aa13.4□□□□□ -0.26
AC004704.1-201ENST00000511219 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
AC004704.1-201ENST00000511219 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
AC004704.1-201ENST00000511219 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
AC004704.1-201ENST00000511219 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
AC004704.1-201ENST00000511219 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
AC004704.1-201ENST00000511219 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
AC004704.1-201ENST00000511219 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
AC004704.1-201ENST00000511219 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
AC004704.1-201ENST00000511219 GABBR2O75899 941 aa13.04□□□□□ -0.32
AC004704.1-201ENST00000511219 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC004704.1-201ENST00000511219 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
AC004704.1-201ENST00000511219 LHX8Q68G74 356 aa12.85□□□□□ -0.35
AC004704.1-201ENST00000511219 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
AC004704.1-201ENST00000511219 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
AC004704.1-201ENST00000511219 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
AC004704.1-201ENST00000511219 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
AC004704.1-201ENST00000511219 CLCN6P51797 869 aa12.72□□□□□ -0.37
AC004704.1-201ENST00000511219 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
AC004704.1-201ENST00000511219 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
AC004704.1-201ENST00000511219 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
AC004704.1-201ENST00000511219 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
AC004704.1-201ENST00000511219 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
AC004704.1-201ENST00000511219 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
AC004704.1-201ENST00000511219 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
AC004704.1-201ENST00000511219 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
AC004704.1-201ENST00000511219 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
AC004704.1-201ENST00000511219 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
AC004704.1-201ENST00000511219 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
AC004704.1-201ENST00000511219 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
AC004704.1-201ENST00000511219 OTUD5Q96G74 571 aa12.38□□□□□ -0.43
AC004704.1-201ENST00000511219 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
AC004704.1-201ENST00000511219 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC004704.1-201ENST00000511219 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
AC004704.1-201ENST00000511219 PROM2Q8N271 834 aa12.31□□□□□ -0.44
AC004704.1-201ENST00000511219 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
AC004704.1-201ENST00000511219 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
AC004704.1-201ENST00000511219 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms