RNA–Protein interactions for RNA: ENST00000510921.5

CCNH-208, Transcript of cyclin H, humanhuman

TSL 4

Gene CCNH, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-208ENST00000510921 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
CCNH-208ENST00000510921 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
CCNH-208ENST00000510921 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
CCNH-208ENST00000510921 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
CCNH-208ENST00000510921 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
CCNH-208ENST00000510921 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CCNH-208ENST00000510921 MSH5O43196 834 aa17.15■□□□□ 0.34
CCNH-208ENST00000510921 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
CCNH-208ENST00000510921 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
CCNH-208ENST00000510921 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
CCNH-208ENST00000510921 ADRA2BP18089 450 aa16.01■□□□□ 0.15
CCNH-208ENST00000510921 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
CCNH-208ENST00000510921 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
CCNH-208ENST00000510921 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
CCNH-208ENST00000510921 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
CCNH-208ENST00000510921 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
CCNH-208ENST00000510921 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
CCNH-208ENST00000510921 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
CCNH-208ENST00000510921 POTEHQ6S545 545 aa14.2□□□□□ -0.14
CCNH-208ENST00000510921 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
CCNH-208ENST00000510921 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
CCNH-208ENST00000510921 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
CCNH-208ENST00000510921 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
CCNH-208ENST00000510921 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
CCNH-208ENST00000510921 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
CCNH-208ENST00000510921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■■■□□ 15.3
CCNH-208ENST00000510921 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
CCNH-208ENST00000510921 DSG3P32926 999 aa13.34□□□□□ -0.27
CCNH-208ENST00000510921 KCNA4P22459 653 aa13.33□□□□□ -0.28
CCNH-208ENST00000510921 CAPN15O75808 1086 aa13.19□□□□□ -0.3
CCNH-208ENST00000510921 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
CCNH-208ENST00000510921 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
CCNH-208ENST00000510921 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
CCNH-208ENST00000510921 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
CCNH-208ENST00000510921 ABCB7O75027 752 aa12.82□□□□□ -0.36
CCNH-208ENST00000510921 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
CCNH-208ENST00000510921 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
CCNH-208ENST00000510921 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
CCNH-208ENST00000510921 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
CCNH-208ENST00000510921 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
CCNH-208ENST00000510921 APLP2Q06481 763 aa12.56□□□□□ -0.4
CCNH-208ENST00000510921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
CCNH-208ENST00000510921 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
CCNH-208ENST00000510921 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
CCNH-208ENST00000510921 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
CCNH-208ENST00000510921 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
CCNH-208ENST00000510921 HAX1O00165 279 aa12.36□□□□□ -0.43
CCNH-208ENST00000510921 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
CCNH-208ENST00000510921 ZBTB22O15209 634 aa12.25□□□□□ -0.45
CCNH-208ENST00000510921 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CCNH-208ENST00000510921 POLA2Q14181 598 aa12.2□□□□□ -0.46
CCNH-208ENST00000510921 EVX2Q03828 476 aa12.17□□□□□ -0.46
CCNH-208ENST00000510921 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
CCNH-208ENST00000510921 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCNH-208ENST00000510921 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
CCNH-208ENST00000510921 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
CCNH-208ENST00000510921 LHX8Q68G74 356 aa12.06□□□□□ -0.48
CCNH-208ENST00000510921 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
CCNH-208ENST00000510921 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
CCNH-208ENST00000510921 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CCNH-208ENST00000510921 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
CCNH-208ENST00000510921 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
CCNH-208ENST00000510921 GABBR2O75899 941 aa11.82□□□□□ -0.52
CCNH-208ENST00000510921 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
CCNH-208ENST00000510921 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
CCNH-208ENST00000510921 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
CCNH-208ENST00000510921 FBLN2P98095 1184 aa11.62□□□□□ -0.55
CCNH-208ENST00000510921 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
CCNH-208ENST00000510921 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
CCNH-208ENST00000510921 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
CCNH-208ENST00000510921 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
CCNH-208ENST00000510921 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
CCNH-208ENST00000510921 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
CCNH-208ENST00000510921 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
CCNH-208ENST00000510921 POTEMA6NI47 508 aa11.41□□□□□ -0.58
CCNH-208ENST00000510921 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
CCNH-208ENST00000510921 ZNF692Q9BU19 519 aaPredicted RBP11.39□□□□□ -0.59
CCNH-208ENST00000510921 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CCNH-208ENST00000510921 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
CCNH-208ENST00000510921 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
CCNH-208ENST00000510921 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
CCNH-208ENST00000510921 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
CCNH-208ENST00000510921 CLCN6P51797 869 aa11.26□□□□□ -0.61
CCNH-208ENST00000510921 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
CCNH-208ENST00000510921 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCNH-208ENST00000510921 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
CCNH-208ENST00000510921 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
CCNH-208ENST00000510921 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
CCNH-208ENST00000510921 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
CCNH-208ENST00000510921 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
CCNH-208ENST00000510921 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
CCNH-208ENST00000510921 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
CCNH-208ENST00000510921 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
CCNH-208ENST00000510921 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
CCNH-208ENST00000510921 PROM2Q8N271 834 aa10.92□□□□□ -0.66
CCNH-208ENST00000510921 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
CCNH-208ENST00000510921 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
CCNH-208ENST00000510921 POTEJP0CG39 1038 aa10.86□□□□□ -0.67
CCNH-208ENST00000510921 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
CCNH-208ENST00000510921 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms