RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
OTUD4-208ENST00000509620 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
OTUD4-208ENST00000509620 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
OTUD4-208ENST00000509620 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
OTUD4-208ENST00000509620 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
OTUD4-208ENST00000509620 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
OTUD4-208ENST00000509620 FOXD1Q16676 465 aa16.93■□□□□ 0.3
OTUD4-208ENST00000509620 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
OTUD4-208ENST00000509620 ADRA2BP18089 450 aa16.43■□□□□ 0.22
OTUD4-208ENST00000509620 MSH5O43196 834 aa16.21■□□□□ 0.19
OTUD4-208ENST00000509620 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
OTUD4-208ENST00000509620 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
OTUD4-208ENST00000509620 KCNA4P22459 653 aa15.06■□□□□ 0
OTUD4-208ENST00000509620 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
OTUD4-208ENST00000509620 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
OTUD4-208ENST00000509620 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
OTUD4-208ENST00000509620 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
OTUD4-208ENST00000509620 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
OTUD4-208ENST00000509620 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
OTUD4-208ENST00000509620 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
OTUD4-208ENST00000509620 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
OTUD4-208ENST00000509620 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
OTUD4-208ENST00000509620 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
OTUD4-208ENST00000509620 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
OTUD4-208ENST00000509620 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
OTUD4-208ENST00000509620 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
OTUD4-208ENST00000509620 POTEHQ6S545 545 aa13.92□□□□□ -0.18
OTUD4-208ENST00000509620 ZBTB22O15209 634 aa13.91□□□□□ -0.18
OTUD4-208ENST00000509620 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
OTUD4-208ENST00000509620 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
OTUD4-208ENST00000509620 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
OTUD4-208ENST00000509620 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
OTUD4-208ENST00000509620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
OTUD4-208ENST00000509620 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
OTUD4-208ENST00000509620 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
OTUD4-208ENST00000509620 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
OTUD4-208ENST00000509620 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
OTUD4-208ENST00000509620 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
OTUD4-208ENST00000509620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
OTUD4-208ENST00000509620 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
OTUD4-208ENST00000509620 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
OTUD4-208ENST00000509620 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
OTUD4-208ENST00000509620 APLP2Q06481 763 aa13.03□□□□□ -0.32
OTUD4-208ENST00000509620 CAPN15O75808 1086 aa12.98□□□□□ -0.33
OTUD4-208ENST00000509620 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
OTUD4-208ENST00000509620 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
OTUD4-208ENST00000509620 ABCB7O75027 752 aa12.8□□□□□ -0.36
OTUD4-208ENST00000509620 POLA2Q14181 598 aa12.77□□□□□ -0.37
OTUD4-208ENST00000509620 DSG3P32926 999 aa12.73□□□□□ -0.37
OTUD4-208ENST00000509620 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
OTUD4-208ENST00000509620 FKBP8Q14318 412 aa12.55□□□□□ -0.4
OTUD4-208ENST00000509620 FBLN2P98095 1184 aa12.52□□□□□ -0.41
OTUD4-208ENST00000509620 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
OTUD4-208ENST00000509620 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
OTUD4-208ENST00000509620 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
OTUD4-208ENST00000509620 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
OTUD4-208ENST00000509620 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
OTUD4-208ENST00000509620 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
OTUD4-208ENST00000509620 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
OTUD4-208ENST00000509620 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
OTUD4-208ENST00000509620 PROM2Q8N271 834 aa12.18□□□□□ -0.46
OTUD4-208ENST00000509620 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
OTUD4-208ENST00000509620 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
OTUD4-208ENST00000509620 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
OTUD4-208ENST00000509620 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
OTUD4-208ENST00000509620 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
OTUD4-208ENST00000509620 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
OTUD4-208ENST00000509620 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
OTUD4-208ENST00000509620 VASPP50552 380 aaPredicted RBP11.86□□□□□ -0.51
OTUD4-208ENST00000509620 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
OTUD4-208ENST00000509620 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
OTUD4-208ENST00000509620 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
OTUD4-208ENST00000509620 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
OTUD4-208ENST00000509620 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
OTUD4-208ENST00000509620 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
OTUD4-208ENST00000509620 MIER1Q8N108 512 aa11.69□□□□□ -0.54
OTUD4-208ENST00000509620 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
OTUD4-208ENST00000509620 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
OTUD4-208ENST00000509620 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
OTUD4-208ENST00000509620 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
OTUD4-208ENST00000509620 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
OTUD4-208ENST00000509620 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
OTUD4-208ENST00000509620 LHX8Q68G74 356 aa11.58□□□□□ -0.56
OTUD4-208ENST00000509620 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
OTUD4-208ENST00000509620 HAX1O00165 279 aa11.53□□□□□ -0.56
OTUD4-208ENST00000509620 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
OTUD4-208ENST00000509620 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
OTUD4-208ENST00000509620 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
OTUD4-208ENST00000509620 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
OTUD4-208ENST00000509620 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
OTUD4-208ENST00000509620 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
OTUD4-208ENST00000509620 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
OTUD4-208ENST00000509620 NUBP1P53384 320 aa11.42□□□□□ -0.58
OTUD4-208ENST00000509620 PKD2Q13563 968 aa11.41□□□□□ -0.58
OTUD4-208ENST00000509620 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
OTUD4-208ENST00000509620 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
OTUD4-208ENST00000509620 EVX2Q03828 476 aa11.35□□□□□ -0.59
OTUD4-208ENST00000509620 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
OTUD4-208ENST00000509620 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
OTUD4-208ENST00000509620 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms