RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
GYPA-206ENST00000509346 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
GYPA-206ENST00000509346 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
GYPA-206ENST00000509346 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
GYPA-206ENST00000509346 FOXD1Q16676 465 aa14.14□□□□□ -0.15
GYPA-206ENST00000509346 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
GYPA-206ENST00000509346 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
GYPA-206ENST00000509346 ADRA2BP18089 450 aa13.2□□□□□ -0.3
GYPA-206ENST00000509346 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
GYPA-206ENST00000509346 MSH5O43196 834 aa13.12□□□□□ -0.31
GYPA-206ENST00000509346 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
GYPA-206ENST00000509346 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
GYPA-206ENST00000509346 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
GYPA-206ENST00000509346 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
GYPA-206ENST00000509346 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
GYPA-206ENST00000509346 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
GYPA-206ENST00000509346 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
GYPA-206ENST00000509346 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
GYPA-206ENST00000509346 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
GYPA-206ENST00000509346 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
GYPA-206ENST00000509346 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
GYPA-206ENST00000509346 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
GYPA-206ENST00000509346 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
GYPA-206ENST00000509346 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
GYPA-206ENST00000509346 KCNA4P22459 653 aa11.14□□□□□ -0.63
GYPA-206ENST00000509346 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
GYPA-206ENST00000509346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.66
GYPA-206ENST00000509346 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
GYPA-206ENST00000509346 SLC4A2P04920 1241 aa10.83□□□□□ -0.68
GYPA-206ENST00000509346 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
GYPA-206ENST00000509346 DSG3P32926 999 aa10.57□□□□□ -0.72
GYPA-206ENST00000509346 CAPN15O75808 1086 aa10.53□□□□□ -0.72
GYPA-206ENST00000509346 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
GYPA-206ENST00000509346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
GYPA-206ENST00000509346 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
GYPA-206ENST00000509346 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
GYPA-206ENST00000509346 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
GYPA-206ENST00000509346 APLP2Q06481 763 aa10.39□□□□□ -0.75
GYPA-206ENST00000509346 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
GYPA-206ENST00000509346 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
GYPA-206ENST00000509346 ABCB7O75027 752 aa10.33□□□□□ -0.76
GYPA-206ENST00000509346 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
GYPA-206ENST00000509346 ZBTB22O15209 634 aa10.32□□□□□ -0.76
GYPA-206ENST00000509346 ATF5Q9Y2D1 282 aaPredicted RBP10.25□□□□□ -0.77
GYPA-206ENST00000509346 POLA2Q14181 598 aa10.18□□□□□ -0.78
GYPA-206ENST00000509346 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
GYPA-206ENST00000509346 POTEHQ6S545 545 aa9.99□□□□□ -0.81
GYPA-206ENST00000509346 RBM42Q9BTD8 480 aaKnown RBP9.99□□□□□ -0.81
GYPA-206ENST00000509346 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
GYPA-206ENST00000509346 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
GYPA-206ENST00000509346 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
GYPA-206ENST00000509346 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
GYPA-206ENST00000509346 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
GYPA-206ENST00000509346 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
GYPA-206ENST00000509346 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
GYPA-206ENST00000509346 FBLN2P98095 1184 aa9.67□□□□□ -0.86
GYPA-206ENST00000509346 SPDYE2BA6NHP3 402 aa9.66□□□□□ -0.86
GYPA-206ENST00000509346 SPDYE6P0CI01 402 aa9.66□□□□□ -0.86
GYPA-206ENST00000509346 SPDYE2Q495Y8 402 aa9.66□□□□□ -0.86
GYPA-206ENST00000509346 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
GYPA-206ENST00000509346 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
GYPA-206ENST00000509346 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
GYPA-206ENST00000509346 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
GYPA-206ENST00000509346 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
GYPA-206ENST00000509346 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
GYPA-206ENST00000509346 SPDYE1Q8NFV5 336 aaPredicted RBP9.45□□□□□ -0.9
GYPA-206ENST00000509346 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
GYPA-206ENST00000509346 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
GYPA-206ENST00000509346 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
GYPA-206ENST00000509346 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
GYPA-206ENST00000509346 EVX2Q03828 476 aa9.36□□□□□ -0.91
GYPA-206ENST00000509346 HAX1O00165 279 aa9.32□□□□□ -0.92
GYPA-206ENST00000509346 CHADLQ6NUI6 762 aa9.28□□□□□ -0.92
GYPA-206ENST00000509346 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
GYPA-206ENST00000509346 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
GYPA-206ENST00000509346 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
GYPA-206ENST00000509346 PROM2Q8N271 834 aa9.18□□□□□ -0.94
GYPA-206ENST00000509346 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
GYPA-206ENST00000509346 CREBZFQ9NS37 354 aa9.15□□□□□ -0.94
GYPA-206ENST00000509346 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
GYPA-206ENST00000509346 GABBR2O75899 941 aa9.08□□□□□ -0.96
GYPA-206ENST00000509346 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
GYPA-206ENST00000509346 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
GYPA-206ENST00000509346 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
GYPA-206ENST00000509346 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
GYPA-206ENST00000509346 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
GYPA-206ENST00000509346 CLCN6P51797 869 aa8.91□□□□□ -0.98
GYPA-206ENST00000509346 GALR2O43603 387 aaPredicted RBP8.86□□□□□ -0.99
GYPA-206ENST00000509346 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
GYPA-206ENST00000509346 PHF12Q96QT6 1004 aa8.85□□□□□ -0.99
GYPA-206ENST00000509346 FKBP8Q14318 412 aa8.83□□□□□ -1
GYPA-206ENST00000509346 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
GYPA-206ENST00000509346 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
GYPA-206ENST00000509346 LHX8Q68G74 356 aa8.78□□□□□ -1
GYPA-206ENST00000509346 MIER1Q8N108 512 aa8.76□□□□□ -1.01
GYPA-206ENST00000509346 DCBLD2Q96PD2 775 aa8.76□□□□□ -1.01
GYPA-206ENST00000509346 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
GYPA-206ENST00000509346 MS4A3Q96HJ5 214 aa8.74□□□□□ -1.01
GYPA-206ENST00000509346 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
GYPA-206ENST00000509346 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms