RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
CALCOCO2-212ENST00000509014 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
CALCOCO2-212ENST00000509014 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
CALCOCO2-212ENST00000509014 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
CALCOCO2-212ENST00000509014 FOXD1Q16676 465 aa20.22■□□□□ 0.83
CALCOCO2-212ENST00000509014 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
CALCOCO2-212ENST00000509014 MSH5O43196 834 aa18.98■□□□□ 0.63
CALCOCO2-212ENST00000509014 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
CALCOCO2-212ENST00000509014 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
CALCOCO2-212ENST00000509014 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
CALCOCO2-212ENST00000509014 ADRA2BP18089 450 aa18.71■□□□□ 0.59
CALCOCO2-212ENST00000509014 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO2-212ENST00000509014 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
CALCOCO2-212ENST00000509014 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
CALCOCO2-212ENST00000509014 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
CALCOCO2-212ENST00000509014 KCNA4P22459 653 aa16.91■□□□□ 0.3
CALCOCO2-212ENST00000509014 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
CALCOCO2-212ENST00000509014 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
CALCOCO2-212ENST00000509014 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
CALCOCO2-212ENST00000509014 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
CALCOCO2-212ENST00000509014 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
CALCOCO2-212ENST00000509014 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO2-212ENST00000509014 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO2-212ENST00000509014 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
CALCOCO2-212ENST00000509014 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
CALCOCO2-212ENST00000509014 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
CALCOCO2-212ENST00000509014 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
CALCOCO2-212ENST00000509014 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
CALCOCO2-212ENST00000509014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.15e-7■□□□□ 10.8
CALCOCO2-212ENST00000509014 ZBTB22O15209 634 aa15.62■□□□□ 0.09
CALCOCO2-212ENST00000509014 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
CALCOCO2-212ENST00000509014 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
CALCOCO2-212ENST00000509014 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
CALCOCO2-212ENST00000509014 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
CALCOCO2-212ENST00000509014 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
CALCOCO2-212ENST00000509014 CAPN15O75808 1086 aa15.18■□□□□ 0.02
CALCOCO2-212ENST00000509014 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO2-212ENST00000509014 DSG3P32926 999 aa15.09■□□□□ 0.01
CALCOCO2-212ENST00000509014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
CALCOCO2-212ENST00000509014 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
CALCOCO2-212ENST00000509014 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
CALCOCO2-212ENST00000509014 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
CALCOCO2-212ENST00000509014 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO2-212ENST00000509014 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO2-212ENST00000509014 APLP2Q06481 763 aa14.83□□□□□ -0.04
CALCOCO2-212ENST00000509014 ABCB7O75027 752 aa14.82□□□□□ -0.04
CALCOCO2-212ENST00000509014 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
CALCOCO2-212ENST00000509014 POTEHQ6S545 545 aa14.78□□□□□ -0.04
CALCOCO2-212ENST00000509014 POLA2Q14181 598 aa14.43□□□□□ -0.1
CALCOCO2-212ENST00000509014 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
CALCOCO2-212ENST00000509014 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-212ENST00000509014 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
CALCOCO2-212ENST00000509014 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
CALCOCO2-212ENST00000509014 FBLN2P98095 1184 aa14.13□□□□□ -0.15
CALCOCO2-212ENST00000509014 FKBP8Q14318 412 aa14.02□□□□□ -0.17
CALCOCO2-212ENST00000509014 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
CALCOCO2-212ENST00000509014 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
CALCOCO2-212ENST00000509014 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO2-212ENST00000509014 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CALCOCO2-212ENST00000509014 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
CALCOCO2-212ENST00000509014 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
CALCOCO2-212ENST00000509014 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
CALCOCO2-212ENST00000509014 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
CALCOCO2-212ENST00000509014 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
CALCOCO2-212ENST00000509014 PROM2Q8N271 834 aa13.76□□□□□ -0.21
CALCOCO2-212ENST00000509014 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
CALCOCO2-212ENST00000509014 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-212ENST00000509014 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-212ENST00000509014 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
CALCOCO2-212ENST00000509014 HAX1O00165 279 aa13.65□□□□□ -0.22
CALCOCO2-212ENST00000509014 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
CALCOCO2-212ENST00000509014 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
CALCOCO2-212ENST00000509014 EVX2Q03828 476 aa13.45□□□□□ -0.26
CALCOCO2-212ENST00000509014 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO2-212ENST00000509014 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
CALCOCO2-212ENST00000509014 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
CALCOCO2-212ENST00000509014 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
CALCOCO2-212ENST00000509014 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-212ENST00000509014 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
CALCOCO2-212ENST00000509014 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
CALCOCO2-212ENST00000509014 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
CALCOCO2-212ENST00000509014 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-212ENST00000509014 MIER1Q8N108 512 aa13.13□□□□□ -0.31
CALCOCO2-212ENST00000509014 GABBR2O75899 941 aa13.12□□□□□ -0.31
CALCOCO2-212ENST00000509014 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
CALCOCO2-212ENST00000509014 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
CALCOCO2-212ENST00000509014 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-212ENST00000509014 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CALCOCO2-212ENST00000509014 KLHL34Q8N239 644 aa13□□□□□ -0.33
CALCOCO2-212ENST00000509014 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-212ENST00000509014 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-212ENST00000509014 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
CALCOCO2-212ENST00000509014 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO2-212ENST00000509014 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
CALCOCO2-212ENST00000509014 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO2-212ENST00000509014 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
CALCOCO2-212ENST00000509014 LHX8Q68G74 356 aa12.91□□□□□ -0.34
CALCOCO2-212ENST00000509014 NUBP1P53384 320 aa12.86□□□□□ -0.35
CALCOCO2-212ENST00000509014 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
CALCOCO2-212ENST00000509014 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 651.4 ms