RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
GYPB-210ENST00000508841 CHIC1Q5VXU3 224 aa29.21■■■□□ 2.27
GYPB-210ENST00000508841 SENP3Q9H4L4 574 aaPredicted RBP26.73■■□□□ 1.87
GYPB-210ENST00000508841 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
GYPB-210ENST00000508841 FOXD1Q16676 465 aa24.96■■□□□ 1.59
GYPB-210ENST00000508841 POTEDQ86YR6 584 aa23.86■■□□□ 1.41
GYPB-210ENST00000508841 MSH5O43196 834 aa23.58■■□□□ 1.37
GYPB-210ENST00000508841 PIAS4Q8N2W9 510 aaPredicted RBP23.23■■□□□ 1.31
GYPB-210ENST00000508841 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
GYPB-210ENST00000508841 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
GYPB-210ENST00000508841 ADRA2BP18089 450 aa22.86■■□□□ 1.25
GYPB-210ENST00000508841 MAPK8IP2Q13387 824 aaPredicted RBP21.15■□□□□ 0.98
GYPB-210ENST00000508841 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
GYPB-210ENST00000508841 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
GYPB-210ENST00000508841 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
GYPB-210ENST00000508841 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
GYPB-210ENST00000508841 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
GYPB-210ENST00000508841 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
GYPB-210ENST00000508841 KCNA4P22459 653 aa20.11■□□□□ 0.81
GYPB-210ENST00000508841 RNF39Q9H2S5 420 aa20.05■□□□□ 0.8
GYPB-210ENST00000508841 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
GYPB-210ENST00000508841 CNKSR2Q8WXI2 1034 aa19.91■□□□□ 0.78
GYPB-210ENST00000508841 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
GYPB-210ENST00000508841 C1QBPQ07021 282 aaKnown RBP19.74■□□□□ 0.75
GYPB-210ENST00000508841 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
GYPB-210ENST00000508841 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
GYPB-210ENST00000508841 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
GYPB-210ENST00000508841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
GYPB-210ENST00000508841 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
GYPB-210ENST00000508841 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
GYPB-210ENST00000508841 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
GYPB-210ENST00000508841 CAPN15O75808 1086 aa18.65■□□□□ 0.58
GYPB-210ENST00000508841 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
GYPB-210ENST00000508841 DSG3P32926 999 aa18.61■□□□□ 0.57
GYPB-210ENST00000508841 POTEHQ6S545 545 aa18.61■□□□□ 0.57
GYPB-210ENST00000508841 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
GYPB-210ENST00000508841 ZBTB22O15209 634 aa18.46■□□□□ 0.55
GYPB-210ENST00000508841 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
GYPB-210ENST00000508841 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
GYPB-210ENST00000508841 APLP2Q06481 763 aa18.19■□□□□ 0.5
GYPB-210ENST00000508841 ABCB7O75027 752 aa18.16■□□□□ 0.5
GYPB-210ENST00000508841 ZNF219Q9P2Y4 722 aaPredicted RBP18.15■□□□□ 0.5
GYPB-210ENST00000508841 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
GYPB-210ENST00000508841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
GYPB-210ENST00000508841 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
GYPB-210ENST00000508841 ATXN8OSP0DMR3 200 aa17.92■□□□□ 0.46
GYPB-210ENST00000508841 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
GYPB-210ENST00000508841 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
GYPB-210ENST00000508841 POLA2Q14181 598 aa17.6■□□□□ 0.41
GYPB-210ENST00000508841 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
GYPB-210ENST00000508841 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
GYPB-210ENST00000508841 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
GYPB-210ENST00000508841 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
GYPB-210ENST00000508841 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
GYPB-210ENST00000508841 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
GYPB-210ENST00000508841 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
GYPB-210ENST00000508841 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
GYPB-210ENST00000508841 HAX1O00165 279 aa16.93■□□□□ 0.3
GYPB-210ENST00000508841 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
GYPB-210ENST00000508841 FKBP8Q14318 412 aa16.93■□□□□ 0.3
GYPB-210ENST00000508841 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
GYPB-210ENST00000508841 FBLN2P98095 1184 aa16.87■□□□□ 0.29
GYPB-210ENST00000508841 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
GYPB-210ENST00000508841 EVX2Q03828 476 aa16.63■□□□□ 0.25
GYPB-210ENST00000508841 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
GYPB-210ENST00000508841 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
GYPB-210ENST00000508841 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
GYPB-210ENST00000508841 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
GYPB-210ENST00000508841 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
GYPB-210ENST00000508841 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
GYPB-210ENST00000508841 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
GYPB-210ENST00000508841 PROM2Q8N271 834 aa16.39■□□□□ 0.21
GYPB-210ENST00000508841 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
GYPB-210ENST00000508841 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
GYPB-210ENST00000508841 C19orf67A6NJJ6 358 aa16.35■□□□□ 0.21
GYPB-210ENST00000508841 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
GYPB-210ENST00000508841 GABBR2O75899 941 aa16.26■□□□□ 0.19
GYPB-210ENST00000508841 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
GYPB-210ENST00000508841 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
GYPB-210ENST00000508841 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
GYPB-210ENST00000508841 LHX8Q68G74 356 aa16.14■□□□□ 0.17
GYPB-210ENST00000508841 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
GYPB-210ENST00000508841 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
GYPB-210ENST00000508841 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
GYPB-210ENST00000508841 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
GYPB-210ENST00000508841 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
GYPB-210ENST00000508841 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
GYPB-210ENST00000508841 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
GYPB-210ENST00000508841 CLCN6P51797 869 aa15.81■□□□□ 0.12
GYPB-210ENST00000508841 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
GYPB-210ENST00000508841 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
GYPB-210ENST00000508841 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
GYPB-210ENST00000508841 DCBLD2Q96PD2 775 aa15.74■□□□□ 0.11
GYPB-210ENST00000508841 MIER1Q8N108 512 aa15.71■□□□□ 0.11
GYPB-210ENST00000508841 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
GYPB-210ENST00000508841 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
GYPB-210ENST00000508841 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
GYPB-210ENST00000508841 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
GYPB-210ENST00000508841 SPOCK2Q92563 424 aa15.63■□□□□ 0.09
GYPB-210ENST00000508841 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms