RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
GYPB-209ENST00000508618 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
GYPB-209ENST00000508618 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
GYPB-209ENST00000508618 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
GYPB-209ENST00000508618 FOXD1Q16676 465 aa20.45■□□□□ 0.86
GYPB-209ENST00000508618 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
GYPB-209ENST00000508618 MSH5O43196 834 aa19.27■□□□□ 0.68
GYPB-209ENST00000508618 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
GYPB-209ENST00000508618 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
GYPB-209ENST00000508618 ADRA2BP18089 450 aa18.95■□□□□ 0.62
GYPB-209ENST00000508618 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
GYPB-209ENST00000508618 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
GYPB-209ENST00000508618 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
GYPB-209ENST00000508618 MAPK8IP2Q13387 824 aaPredicted RBP17.39■□□□□ 0.37
GYPB-209ENST00000508618 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
GYPB-209ENST00000508618 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
GYPB-209ENST00000508618 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
GYPB-209ENST00000508618 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
GYPB-209ENST00000508618 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
GYPB-209ENST00000508618 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
GYPB-209ENST00000508618 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
GYPB-209ENST00000508618 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
GYPB-209ENST00000508618 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
GYPB-209ENST00000508618 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
GYPB-209ENST00000508618 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
GYPB-209ENST00000508618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
GYPB-209ENST00000508618 KCNA4P22459 653 aa15.74■□□□□ 0.11
GYPB-209ENST00000508618 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
GYPB-209ENST00000508618 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
GYPB-209ENST00000508618 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
GYPB-209ENST00000508618 CAPN15O75808 1086 aa15.32■□□□□ 0.04
GYPB-209ENST00000508618 DSG3P32926 999 aa15.31■□□□□ 0.04
GYPB-209ENST00000508618 APLP2Q06481 763 aa15.27■□□□□ 0.04
GYPB-209ENST00000508618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
GYPB-209ENST00000508618 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
GYPB-209ENST00000508618 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
GYPB-209ENST00000508618 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
GYPB-209ENST00000508618 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
GYPB-209ENST00000508618 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
GYPB-209ENST00000508618 ABCB7O75027 752 aa14.94□□□□□ -0.02
GYPB-209ENST00000508618 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
GYPB-209ENST00000508618 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
GYPB-209ENST00000508618 POTEHQ6S545 545 aa14.74□□□□□ -0.05
GYPB-209ENST00000508618 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
GYPB-209ENST00000508618 POLA2Q14181 598 aa14.65□□□□□ -0.06
GYPB-209ENST00000508618 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
GYPB-209ENST00000508618 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
GYPB-209ENST00000508618 ZBTB22O15209 634 aa14.47□□□□□ -0.09
GYPB-209ENST00000508618 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
GYPB-209ENST00000508618 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
GYPB-209ENST00000508618 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
GYPB-209ENST00000508618 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
GYPB-209ENST00000508618 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
GYPB-209ENST00000508618 FBLN2P98095 1184 aa14.05□□□□□ -0.16
GYPB-209ENST00000508618 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
GYPB-209ENST00000508618 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
GYPB-209ENST00000508618 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
GYPB-209ENST00000508618 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
GYPB-209ENST00000508618 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
GYPB-209ENST00000508618 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
GYPB-209ENST00000508618 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
GYPB-209ENST00000508618 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
GYPB-209ENST00000508618 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
GYPB-209ENST00000508618 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
GYPB-209ENST00000508618 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
GYPB-209ENST00000508618 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
GYPB-209ENST00000508618 HAX1O00165 279 aa13.65□□□□□ -0.22
GYPB-209ENST00000508618 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
GYPB-209ENST00000508618 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
GYPB-209ENST00000508618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
GYPB-209ENST00000508618 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
GYPB-209ENST00000508618 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
GYPB-209ENST00000508618 EVX2Q03828 476 aa13.45□□□□□ -0.26
GYPB-209ENST00000508618 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
GYPB-209ENST00000508618 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
GYPB-209ENST00000508618 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
GYPB-209ENST00000508618 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
GYPB-209ENST00000508618 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
GYPB-209ENST00000508618 GABBR2O75899 941 aa13.2□□□□□ -0.3
GYPB-209ENST00000508618 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
GYPB-209ENST00000508618 CLCN6P51797 869 aa13.15□□□□□ -0.3
GYPB-209ENST00000508618 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
GYPB-209ENST00000508618 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
GYPB-209ENST00000508618 PROM2Q8N271 834 aa13□□□□□ -0.33
GYPB-209ENST00000508618 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
GYPB-209ENST00000508618 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
GYPB-209ENST00000508618 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
GYPB-209ENST00000508618 LHX8Q68G74 356 aa12.91□□□□□ -0.34
GYPB-209ENST00000508618 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
GYPB-209ENST00000508618 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
GYPB-209ENST00000508618 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
GYPB-209ENST00000508618 GALR2O43603 387 aaPredicted RBP12.78□□□□□ -0.36
GYPB-209ENST00000508618 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
GYPB-209ENST00000508618 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
GYPB-209ENST00000508618 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
GYPB-209ENST00000508618 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
GYPB-209ENST00000508618 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
GYPB-209ENST00000508618 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
GYPB-209ENST00000508618 MIER1Q8N108 512 aa12.55□□□□□ -0.4
GYPB-209ENST00000508618 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms