RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
GYPA-205ENST00000508337 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
GYPA-205ENST00000508337 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
GYPA-205ENST00000508337 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
GYPA-205ENST00000508337 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
GYPA-205ENST00000508337 FOXD1Q16676 465 aa20.9■□□□□ 0.94
GYPA-205ENST00000508337 ADRA2BP18089 450 aa20.18■□□□□ 0.82
GYPA-205ENST00000508337 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
GYPA-205ENST00000508337 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
GYPA-205ENST00000508337 MSH5O43196 834 aa19.4■□□□□ 0.7
GYPA-205ENST00000508337 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
GYPA-205ENST00000508337 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
GYPA-205ENST00000508337 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
GYPA-205ENST00000508337 KCNA4P22459 653 aa18.35■□□□□ 0.53
GYPA-205ENST00000508337 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
GYPA-205ENST00000508337 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
GYPA-205ENST00000508337 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
GYPA-205ENST00000508337 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
GYPA-205ENST00000508337 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
GYPA-205ENST00000508337 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
GYPA-205ENST00000508337 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
GYPA-205ENST00000508337 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
GYPA-205ENST00000508337 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
GYPA-205ENST00000508337 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
GYPA-205ENST00000508337 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
GYPA-205ENST00000508337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
GYPA-205ENST00000508337 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
GYPA-205ENST00000508337 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
GYPA-205ENST00000508337 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
GYPA-205ENST00000508337 ZBTB22O15209 634 aa16.79■□□□□ 0.28
GYPA-205ENST00000508337 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
GYPA-205ENST00000508337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
GYPA-205ENST00000508337 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
GYPA-205ENST00000508337 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
GYPA-205ENST00000508337 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
GYPA-205ENST00000508337 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
GYPA-205ENST00000508337 APLP2Q06481 763 aa16.48■□□□□ 0.23
GYPA-205ENST00000508337 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
GYPA-205ENST00000508337 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
GYPA-205ENST00000508337 CAPN15O75808 1086 aa16.21■□□□□ 0.19
GYPA-205ENST00000508337 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
GYPA-205ENST00000508337 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
GYPA-205ENST00000508337 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
GYPA-205ENST00000508337 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
GYPA-205ENST00000508337 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
GYPA-205ENST00000508337 ABCB7O75027 752 aa15.86■□□□□ 0.13
GYPA-205ENST00000508337 POLA2Q14181 598 aa15.8■□□□□ 0.12
GYPA-205ENST00000508337 DSG3P32926 999 aa15.74■□□□□ 0.11
GYPA-205ENST00000508337 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
GYPA-205ENST00000508337 FBLN2P98095 1184 aa15.67■□□□□ 0.1
GYPA-205ENST00000508337 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
GYPA-205ENST00000508337 FKBP8Q14318 412 aa15.36■□□□□ 0.05
GYPA-205ENST00000508337 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
GYPA-205ENST00000508337 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
GYPA-205ENST00000508337 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
GYPA-205ENST00000508337 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
GYPA-205ENST00000508337 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
GYPA-205ENST00000508337 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
GYPA-205ENST00000508337 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
GYPA-205ENST00000508337 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
GYPA-205ENST00000508337 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
GYPA-205ENST00000508337 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
GYPA-205ENST00000508337 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
GYPA-205ENST00000508337 PROM2Q8N271 834 aa14.8□□□□□ -0.04
GYPA-205ENST00000508337 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
GYPA-205ENST00000508337 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
GYPA-205ENST00000508337 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
GYPA-205ENST00000508337 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
GYPA-205ENST00000508337 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
GYPA-205ENST00000508337 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
GYPA-205ENST00000508337 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
GYPA-205ENST00000508337 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
GYPA-205ENST00000508337 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
GYPA-205ENST00000508337 MIER1Q8N108 512 aa14.49□□□□□ -0.09
GYPA-205ENST00000508337 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
GYPA-205ENST00000508337 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
GYPA-205ENST00000508337 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
GYPA-205ENST00000508337 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
GYPA-205ENST00000508337 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
GYPA-205ENST00000508337 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
GYPA-205ENST00000508337 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
GYPA-205ENST00000508337 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
GYPA-205ENST00000508337 SPOCK2Q92563 424 aa14.22□□□□□ -0.13
GYPA-205ENST00000508337 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
GYPA-205ENST00000508337 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
GYPA-205ENST00000508337 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
GYPA-205ENST00000508337 FARP1Q9Y4F1 1045 aaPredicted RBP14.11□□□□□ -0.15
GYPA-205ENST00000508337 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
GYPA-205ENST00000508337 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
GYPA-205ENST00000508337 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
GYPA-205ENST00000508337 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
GYPA-205ENST00000508337 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
GYPA-205ENST00000508337 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
GYPA-205ENST00000508337 GSE1Q14687 1217 aa13.99□□□□□ -0.17
GYPA-205ENST00000508337 NUBP1P53384 320 aa13.95□□□□□ -0.18
GYPA-205ENST00000508337 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
GYPA-205ENST00000508337 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
GYPA-205ENST00000508337 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
GYPA-205ENST00000508337 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
GYPA-205ENST00000508337 TRIM41Q8WV44 630 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 372.1 ms