RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
SLF1-207ENST00000508130 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
SLF1-207ENST00000508130 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
SLF1-207ENST00000508130 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
SLF1-207ENST00000508130 FOXD1Q16676 465 aa18.72■□□□□ 0.59
SLF1-207ENST00000508130 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
SLF1-207ENST00000508130 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
SLF1-207ENST00000508130 MSH5O43196 834 aa17.49■□□□□ 0.39
SLF1-207ENST00000508130 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
SLF1-207ENST00000508130 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
SLF1-207ENST00000508130 ADRA2BP18089 450 aa17.39■□□□□ 0.37
SLF1-207ENST00000508130 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
SLF1-207ENST00000508130 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
SLF1-207ENST00000508130 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
SLF1-207ENST00000508130 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
SLF1-207ENST00000508130 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SLF1-207ENST00000508130 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
SLF1-207ENST00000508130 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
SLF1-207ENST00000508130 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
SLF1-207ENST00000508130 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
SLF1-207ENST00000508130 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
SLF1-207ENST00000508130 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
SLF1-207ENST00000508130 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
SLF1-207ENST00000508130 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
SLF1-207ENST00000508130 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
SLF1-207ENST00000508130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
SLF1-207ENST00000508130 KCNA4P22459 653 aa14.3□□□□□ -0.12
SLF1-207ENST00000508130 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
SLF1-207ENST00000508130 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
SLF1-207ENST00000508130 CAPN15O75808 1086 aa14.05□□□□□ -0.16
SLF1-207ENST00000508130 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
SLF1-207ENST00000508130 DSG3P32926 999 aa13.98□□□□□ -0.17
SLF1-207ENST00000508130 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
SLF1-207ENST00000508130 ABCB7O75027 752 aa13.74□□□□□ -0.21
SLF1-207ENST00000508130 APLP2Q06481 763 aa13.73□□□□□ -0.21
SLF1-207ENST00000508130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
SLF1-207ENST00000508130 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
SLF1-207ENST00000508130 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
SLF1-207ENST00000508130 POTEHQ6S545 545 aa13.65□□□□□ -0.22
SLF1-207ENST00000508130 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
SLF1-207ENST00000508130 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
SLF1-207ENST00000508130 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
SLF1-207ENST00000508130 POLA2Q14181 598 aa13.41□□□□□ -0.26
SLF1-207ENST00000508130 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
SLF1-207ENST00000508130 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
SLF1-207ENST00000508130 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SLF1-207ENST00000508130 ZBTB22O15209 634 aa13.15□□□□□ -0.3
SLF1-207ENST00000508130 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
SLF1-207ENST00000508130 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
SLF1-207ENST00000508130 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
SLF1-207ENST00000508130 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
SLF1-207ENST00000508130 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
SLF1-207ENST00000508130 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
SLF1-207ENST00000508130 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
SLF1-207ENST00000508130 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
SLF1-207ENST00000508130 FBLN2P98095 1184 aa12.7□□□□□ -0.38
SLF1-207ENST00000508130 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
SLF1-207ENST00000508130 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
SLF1-207ENST00000508130 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
SLF1-207ENST00000508130 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLF1-207ENST00000508130 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
SLF1-207ENST00000508130 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
SLF1-207ENST00000508130 HAX1O00165 279 aa12.58□□□□□ -0.4
SLF1-207ENST00000508130 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
SLF1-207ENST00000508130 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
SLF1-207ENST00000508130 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
SLF1-207ENST00000508130 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
SLF1-207ENST00000508130 EVX2Q03828 476 aa12.45□□□□□ -0.42
SLF1-207ENST00000508130 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
SLF1-207ENST00000508130 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
SLF1-207ENST00000508130 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
SLF1-207ENST00000508130 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
SLF1-207ENST00000508130 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
SLF1-207ENST00000508130 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
SLF1-207ENST00000508130 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
SLF1-207ENST00000508130 GABBR2O75899 941 aa12.12□□□□□ -0.47
SLF1-207ENST00000508130 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
SLF1-207ENST00000508130 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
SLF1-207ENST00000508130 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
SLF1-207ENST00000508130 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
SLF1-207ENST00000508130 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
SLF1-207ENST00000508130 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
SLF1-207ENST00000508130 LHX8Q68G74 356 aa11.87□□□□□ -0.51
SLF1-207ENST00000508130 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
SLF1-207ENST00000508130 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
SLF1-207ENST00000508130 CLCN6P51797 869 aa11.78□□□□□ -0.52
SLF1-207ENST00000508130 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
SLF1-207ENST00000508130 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
SLF1-207ENST00000508130 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
SLF1-207ENST00000508130 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
SLF1-207ENST00000508130 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
SLF1-207ENST00000508130 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
SLF1-207ENST00000508130 PROM2Q8N271 834 aa11.63□□□□□ -0.55
SLF1-207ENST00000508130 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
SLF1-207ENST00000508130 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
SLF1-207ENST00000508130 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
SLF1-207ENST00000508130 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
SLF1-207ENST00000508130 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
SLF1-207ENST00000508130 MIER1Q8N108 512 aa11.47□□□□□ -0.57
SLF1-207ENST00000508130 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms