RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 AEBP2Q6ZN18 517 aaPredicted RBP32.24■■■□□ 2.75
LINC02428-201ENST00000508099 CHIC1Q5VXU3 224 aa30.47■■■□□ 2.47
LINC02428-201ENST00000508099 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
LINC02428-201ENST00000508099 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
LINC02428-201ENST00000508099 FOXD1Q16676 465 aa25.7■■□□□ 1.7
LINC02428-201ENST00000508099 PLPPR3Q6T4P5 718 aa24.28■■□□□ 1.48
LINC02428-201ENST00000508099 MSH5O43196 834 aa24.19■■□□□ 1.46
LINC02428-201ENST00000508099 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
LINC02428-201ENST00000508099 POTEDQ86YR6 584 aa23.94■■□□□ 1.42
LINC02428-201ENST00000508099 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
LINC02428-201ENST00000508099 ADRA2BP18089 450 aa23.76■■□□□ 1.39
LINC02428-201ENST00000508099 MAPK8IP2Q13387 824 aaPredicted RBP21.87■■□□□ 1.09
LINC02428-201ENST00000508099 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
LINC02428-201ENST00000508099 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
LINC02428-201ENST00000508099 PPP4R3CPQ6ZMV5 832 aa21.22■□□□□ 0.99
LINC02428-201ENST00000508099 HOXD11P31277 338 aaPredicted RBP20.97■□□□□ 0.95
LINC02428-201ENST00000508099 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
LINC02428-201ENST00000508099 CNKSR2Q8WXI2 1034 aa20.9■□□□□ 0.94
LINC02428-201ENST00000508099 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
LINC02428-201ENST00000508099 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
LINC02428-201ENST00000508099 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
LINC02428-201ENST00000508099 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
LINC02428-201ENST00000508099 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
LINC02428-201ENST00000508099 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
LINC02428-201ENST00000508099 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
LINC02428-201ENST00000508099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC02428-201ENST00000508099 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
LINC02428-201ENST00000508099 KCNA4P22459 653 aa19.47■□□□□ 0.71
LINC02428-201ENST00000508099 CAPN15O75808 1086 aa19.27■□□□□ 0.68
LINC02428-201ENST00000508099 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
LINC02428-201ENST00000508099 DSG3P32926 999 aa19.21■□□□□ 0.67
LINC02428-201ENST00000508099 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
LINC02428-201ENST00000508099 APLP2Q06481 763 aa19.03■□□□□ 0.64
LINC02428-201ENST00000508099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
LINC02428-201ENST00000508099 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
LINC02428-201ENST00000508099 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
LINC02428-201ENST00000508099 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
LINC02428-201ENST00000508099 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
LINC02428-201ENST00000508099 ABCB7O75027 752 aa18.78■□□□□ 0.6
LINC02428-201ENST00000508099 POTEHQ6S545 545 aa18.7■□□□□ 0.58
LINC02428-201ENST00000508099 MYCNP04198 464 aaPredicted RBP18.59■□□□□ 0.57
LINC02428-201ENST00000508099 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
LINC02428-201ENST00000508099 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
LINC02428-201ENST00000508099 POLA2Q14181 598 aa18.34■□□□□ 0.53
LINC02428-201ENST00000508099 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
LINC02428-201ENST00000508099 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
LINC02428-201ENST00000508099 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
LINC02428-201ENST00000508099 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
LINC02428-201ENST00000508099 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
LINC02428-201ENST00000508099 ZBTB22O15209 634 aa17.88■□□□□ 0.45
LINC02428-201ENST00000508099 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
LINC02428-201ENST00000508099 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
LINC02428-201ENST00000508099 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
LINC02428-201ENST00000508099 PIP4P2Q8N4L2 257 aa17.54■□□□□ 0.4
LINC02428-201ENST00000508099 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
LINC02428-201ENST00000508099 FBLN2P98095 1184 aa17.49■□□□□ 0.39
LINC02428-201ENST00000508099 SPDYE2BA6NHP3 402 aa17.45■□□□□ 0.38
LINC02428-201ENST00000508099 SPDYE6P0CI01 402 aa17.45■□□□□ 0.38
LINC02428-201ENST00000508099 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
LINC02428-201ENST00000508099 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
LINC02428-201ENST00000508099 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC02428-201ENST00000508099 HAX1O00165 279 aa17.28■□□□□ 0.36
LINC02428-201ENST00000508099 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
LINC02428-201ENST00000508099 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
LINC02428-201ENST00000508099 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
LINC02428-201ENST00000508099 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
LINC02428-201ENST00000508099 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
LINC02428-201ENST00000508099 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
LINC02428-201ENST00000508099 EVX2Q03828 476 aa16.99■□□□□ 0.31
LINC02428-201ENST00000508099 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC02428-201ENST00000508099 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
LINC02428-201ENST00000508099 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
LINC02428-201ENST00000508099 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
LINC02428-201ENST00000508099 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
LINC02428-201ENST00000508099 GABBR2O75899 941 aa16.65■□□□□ 0.26
LINC02428-201ENST00000508099 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
LINC02428-201ENST00000508099 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
LINC02428-201ENST00000508099 CD44P16070 742 aaKnown RBP16.52■□□□□ 0.24
LINC02428-201ENST00000508099 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
LINC02428-201ENST00000508099 CLCN6P51797 869 aa16.4■□□□□ 0.22
LINC02428-201ENST00000508099 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
LINC02428-201ENST00000508099 LHX8Q68G74 356 aa16.35■□□□□ 0.21
LINC02428-201ENST00000508099 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
LINC02428-201ENST00000508099 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
LINC02428-201ENST00000508099 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
LINC02428-201ENST00000508099 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
LINC02428-201ENST00000508099 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
LINC02428-201ENST00000508099 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
LINC02428-201ENST00000508099 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC02428-201ENST00000508099 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
LINC02428-201ENST00000508099 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
LINC02428-201ENST00000508099 PHF12Q96QT6 1004 aa15.99■□□□□ 0.15
LINC02428-201ENST00000508099 PROM2Q8N271 834 aa15.98■□□□□ 0.15
LINC02428-201ENST00000508099 PLSCR2Q9NRY7 297 aa15.82■□□□□ 0.12
LINC02428-201ENST00000508099 MS4A3Q96HJ5 214 aa15.78■□□□□ 0.12
LINC02428-201ENST00000508099 ASTLQ6HA08 431 aaPredicted RBP15.74■□□□□ 0.11
LINC02428-201ENST00000508099 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
LINC02428-201ENST00000508099 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
LINC02428-201ENST00000508099 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
LINC02428-201ENST00000508099 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms