RNA–Protein interactions for RNA: ENST00000507321.1

SNX2-206, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-206ENST00000507321 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
SNX2-206ENST00000507321 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
SNX2-206ENST00000507321 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SNX2-206ENST00000507321 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
SNX2-206ENST00000507321 FOXD1Q16676 465 aa16.96■□□□□ 0.31
SNX2-206ENST00000507321 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
SNX2-206ENST00000507321 MSH5O43196 834 aa16.04■□□□□ 0.16
SNX2-206ENST00000507321 PIAS4Q8N2W9 510 aaPredicted RBP15.77■□□□□ 0.12
SNX2-206ENST00000507321 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
SNX2-206ENST00000507321 ADRA2BP18089 450 aa15.44■□□□□ 0.06
SNX2-206ENST00000507321 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
SNX2-206ENST00000507321 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
SNX2-206ENST00000507321 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
SNX2-206ENST00000507321 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
SNX2-206ENST00000507321 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
SNX2-206ENST00000507321 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
SNX2-206ENST00000507321 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
SNX2-206ENST00000507321 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
SNX2-206ENST00000507321 KCNA4P22459 653 aa13.61□□□□□ -0.23
SNX2-206ENST00000507321 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SNX2-206ENST00000507321 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
SNX2-206ENST00000507321 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
SNX2-206ENST00000507321 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
SNX2-206ENST00000507321 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
SNX2-206ENST00000507321 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
SNX2-206ENST00000507321 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
SNX2-206ENST00000507321 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
SNX2-206ENST00000507321 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
SNX2-206ENST00000507321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
SNX2-206ENST00000507321 POTEHQ6S545 545 aa12.89□□□□□ -0.35
SNX2-206ENST00000507321 CAPN15O75808 1086 aa12.66□□□□□ -0.38
SNX2-206ENST00000507321 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
SNX2-206ENST00000507321 DSG3P32926 999 aa12.62□□□□□ -0.39
SNX2-206ENST00000507321 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
SNX2-206ENST00000507321 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
SNX2-206ENST00000507321 ZBTB22O15209 634 aa12.47□□□□□ -0.41
SNX2-206ENST00000507321 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
SNX2-206ENST00000507321 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
SNX2-206ENST00000507321 ABCB7O75027 752 aa12.34□□□□□ -0.43
SNX2-206ENST00000507321 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
SNX2-206ENST00000507321 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
SNX2-206ENST00000507321 APLP2Q06481 763 aa12.16□□□□□ -0.46
SNX2-206ENST00000507321 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SNX2-206ENST00000507321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
SNX2-206ENST00000507321 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
SNX2-206ENST00000507321 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
SNX2-206ENST00000507321 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
SNX2-206ENST00000507321 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
SNX2-206ENST00000507321 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
SNX2-206ENST00000507321 POLA2Q14181 598 aa11.85□□□□□ -0.51
SNX2-206ENST00000507321 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
SNX2-206ENST00000507321 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
SNX2-206ENST00000507321 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
SNX2-206ENST00000507321 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
SNX2-206ENST00000507321 HAX1O00165 279 aa11.61□□□□□ -0.55
SNX2-206ENST00000507321 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
SNX2-206ENST00000507321 FKBP8Q14318 412 aa11.52□□□□□ -0.57
SNX2-206ENST00000507321 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
SNX2-206ENST00000507321 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
SNX2-206ENST00000507321 PITPNM1O00562 1244 aa11.47□□□□□ -0.57
SNX2-206ENST00000507321 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNX2-206ENST00000507321 EVX2Q03828 476 aa11.39□□□□□ -0.59
SNX2-206ENST00000507321 FBLN2P98095 1184 aa11.34□□□□□ -0.59
SNX2-206ENST00000507321 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
SNX2-206ENST00000507321 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
SNX2-206ENST00000507321 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
SNX2-206ENST00000507321 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
SNX2-206ENST00000507321 LHX8Q68G74 356 aa11.11□□□□□ -0.63
SNX2-206ENST00000507321 SPDYE2BA6NHP3 402 aa11.1□□□□□ -0.63
SNX2-206ENST00000507321 SPDYE6P0CI01 402 aa11.1□□□□□ -0.63
SNX2-206ENST00000507321 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
SNX2-206ENST00000507321 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
SNX2-206ENST00000507321 GABBR2O75899 941 aa11.09□□□□□ -0.63
SNX2-206ENST00000507321 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
SNX2-206ENST00000507321 CHADLQ6NUI6 762 aa11□□□□□ -0.65
SNX2-206ENST00000507321 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
SNX2-206ENST00000507321 FBXO3Q9UK99 471 aa11□□□□□ -0.65
SNX2-206ENST00000507321 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
SNX2-206ENST00000507321 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
SNX2-206ENST00000507321 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
SNX2-206ENST00000507321 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
SNX2-206ENST00000507321 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
SNX2-206ENST00000507321 PROM2Q8N271 834 aa10.87□□□□□ -0.67
SNX2-206ENST00000507321 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
SNX2-206ENST00000507321 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX2-206ENST00000507321 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
SNX2-206ENST00000507321 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
SNX2-206ENST00000507321 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
SNX2-206ENST00000507321 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
SNX2-206ENST00000507321 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
SNX2-206ENST00000507321 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
SNX2-206ENST00000507321 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
SNX2-206ENST00000507321 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
SNX2-206ENST00000507321 MIER1Q8N108 512 aa10.69□□□□□ -0.7
SNX2-206ENST00000507321 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
SNX2-206ENST00000507321 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
SNX2-206ENST00000507321 CLCN6P51797 869 aa10.61□□□□□ -0.71
SNX2-206ENST00000507321 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
SNX2-206ENST00000507321 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
SNX2-206ENST00000507321 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms