RNA–Protein interactions for RNA: ENST00000507258.4

MED17-202, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-202ENST00000507258 NISCHQ9Y2I1 1504 aa29.8■■■□□ 2.36
MED17-202ENST00000507258 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
MED17-202ENST00000507258 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
MED17-202ENST00000507258 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
MED17-202ENST00000507258 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
MED17-202ENST00000507258 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
MED17-202ENST00000507258 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
MED17-202ENST00000507258 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
MED17-202ENST00000507258 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
MED17-202ENST00000507258 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.4
MED17-202ENST00000507258 ABCC9O60706 1549 aa23.79■■□□□ 1.4
MED17-202ENST00000507258 NACADO15069 1562 aa23.53■■□□□ 1.36
MED17-202ENST00000507258 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
MED17-202ENST00000507258 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
MED17-202ENST00000507258 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
MED17-202ENST00000507258 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
MED17-202ENST00000507258 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
MED17-202ENST00000507258 WIZO95785 1651 aa23.08■■□□□ 1.29
MED17-202ENST00000507258 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
MED17-202ENST00000507258 PCGF6Q9BYE7 350 aa23.01■■□□□ 1.27
MED17-202ENST00000507258 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
MED17-202ENST00000507258 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
MED17-202ENST00000507258 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.26
MED17-202ENST00000507258 HRCP23327 699 aa22.81■■□□□ 1.24
MED17-202ENST00000507258 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
MED17-202ENST00000507258 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
MED17-202ENST00000507258 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
MED17-202ENST00000507258 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
MED17-202ENST00000507258 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.21
MED17-202ENST00000507258 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
MED17-202ENST00000507258 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.21
MED17-202ENST00000507258 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
MED17-202ENST00000507258 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
MED17-202ENST00000507258 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
MED17-202ENST00000507258 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
MED17-202ENST00000507258 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
MED17-202ENST00000507258 SOGA1O94964 1423 aa22.24■■□□□ 1.15
MED17-202ENST00000507258 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
MED17-202ENST00000507258 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
MED17-202ENST00000507258 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
MED17-202ENST00000507258 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
MED17-202ENST00000507258 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
MED17-202ENST00000507258 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
MED17-202ENST00000507258 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
MED17-202ENST00000507258 EEA1Q15075 1411 aa21.99■■□□□ 1.11
MED17-202ENST00000507258 UBTFP17480 764 aaKnown RBP21.98■■□□□ 1.11
MED17-202ENST00000507258 TTBK1Q5TCY1 1321 aaPredicted RBP21.96■■□□□ 1.11
MED17-202ENST00000507258 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
MED17-202ENST00000507258 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
MED17-202ENST00000507258 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
MED17-202ENST00000507258 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
MED17-202ENST00000507258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
MED17-202ENST00000507258 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
MED17-202ENST00000507258 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
MED17-202ENST00000507258 KIF21BO75037 1637 aa21.74■■□□□ 1.07
MED17-202ENST00000507258 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
MED17-202ENST00000507258 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
MED17-202ENST00000507258 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
MED17-202ENST00000507258 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
MED17-202ENST00000507258 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
MED17-202ENST00000507258 CLIP1P30622 1438 aa21.64■■□□□ 1.05
MED17-202ENST00000507258 CUX1P39880 1505 aa21.6■■□□□ 1.05
MED17-202ENST00000507258 CFTRP13569 1480 aa21.57■■□□□ 1.04
MED17-202ENST00000507258 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
MED17-202ENST00000507258 PRXQ9BXM0 1461 aa21.47■■□□□ 1.03
MED17-202ENST00000507258 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
MED17-202ENST00000507258 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
MED17-202ENST00000507258 APLP2Q06481 763 aa21.4■■□□□ 1.02
MED17-202ENST00000507258 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
MED17-202ENST00000507258 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.02
MED17-202ENST00000507258 PRDM2Q13029 1718 aa21.39■■□□□ 1.02
MED17-202ENST00000507258 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
MED17-202ENST00000507258 ARAP1Q96P48 1450 aa21.33■■□□□ 1
MED17-202ENST00000507258 CUX2O14529 1486 aa21.29■■□□□ 1
MED17-202ENST00000507258 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
MED17-202ENST00000507258 IGF1RP08069 1367 aa21.22■□□□□ 0.99
MED17-202ENST00000507258 KANK4Q5T7N3 995 aaPredicted RBP21.22■□□□□ 0.99
MED17-202ENST00000507258 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
MED17-202ENST00000507258 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
MED17-202ENST00000507258 NESP48681 1621 aa21.16■□□□□ 0.98
MED17-202ENST00000507258 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
MED17-202ENST00000507258 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
MED17-202ENST00000507258 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
MED17-202ENST00000507258 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
MED17-202ENST00000507258 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
MED17-202ENST00000507258 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.95
MED17-202ENST00000507258 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
MED17-202ENST00000507258 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
MED17-202ENST00000507258 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
MED17-202ENST00000507258 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
MED17-202ENST00000507258 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
MED17-202ENST00000507258 ITGAEP38570 1179 aa20.93■□□□□ 0.94
MED17-202ENST00000507258 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
MED17-202ENST00000507258 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
MED17-202ENST00000507258 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
MED17-202ENST00000507258 DHX57Q6P158 1386 aaKnown RBP20.9■□□□□ 0.94
MED17-202ENST00000507258 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
MED17-202ENST00000507258 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
MED17-202ENST00000507258 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
MED17-202ENST00000507258 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms