RNA–Protein interactions for RNA: ENST00000507193.5

ABCE1-207, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 1 (best)

Gene ABCE1, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-207ENST00000507193 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
ABCE1-207ENST00000507193 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
ABCE1-207ENST00000507193 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
ABCE1-207ENST00000507193 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
ABCE1-207ENST00000507193 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
ABCE1-207ENST00000507193 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
ABCE1-207ENST00000507193 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
ABCE1-207ENST00000507193 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
ABCE1-207ENST00000507193 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
ABCE1-207ENST00000507193 ABCC9O60706 1549 aa16.42■□□□□ 0.22
ABCE1-207ENST00000507193 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
ABCE1-207ENST00000507193 HRCP23327 699 aa16.24■□□□□ 0.19
ABCE1-207ENST00000507193 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
ABCE1-207ENST00000507193 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
ABCE1-207ENST00000507193 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
ABCE1-207ENST00000507193 NACADO15069 1562 aa16.14■□□□□ 0.17
ABCE1-207ENST00000507193 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
ABCE1-207ENST00000507193 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
ABCE1-207ENST00000507193 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
ABCE1-207ENST00000507193 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
ABCE1-207ENST00000507193 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
ABCE1-207ENST00000507193 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
ABCE1-207ENST00000507193 WIZO95785 1651 aa15.86■□□□□ 0.13
ABCE1-207ENST00000507193 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
ABCE1-207ENST00000507193 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
ABCE1-207ENST00000507193 MYT1Q01538 1121 aa15.74■□□□□ 0.11
ABCE1-207ENST00000507193 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
ABCE1-207ENST00000507193 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
ABCE1-207ENST00000507193 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
ABCE1-207ENST00000507193 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
ABCE1-207ENST00000507193 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
ABCE1-207ENST00000507193 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
ABCE1-207ENST00000507193 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
ABCE1-207ENST00000507193 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
ABCE1-207ENST00000507193 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
ABCE1-207ENST00000507193 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
ABCE1-207ENST00000507193 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
ABCE1-207ENST00000507193 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
ABCE1-207ENST00000507193 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
ABCE1-207ENST00000507193 EEA1Q15075 1411 aa15.35■□□□□ 0.05
ABCE1-207ENST00000507193 SOGA1O94964 1423 aa15.33■□□□□ 0.04
ABCE1-207ENST00000507193 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
ABCE1-207ENST00000507193 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
ABCE1-207ENST00000507193 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
ABCE1-207ENST00000507193 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
ABCE1-207ENST00000507193 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
ABCE1-207ENST00000507193 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
ABCE1-207ENST00000507193 GOLGA3Q08378 1498 aa15.21■□□□□ 0.03
ABCE1-207ENST00000507193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
ABCE1-207ENST00000507193 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
ABCE1-207ENST00000507193 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
ABCE1-207ENST00000507193 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
ABCE1-207ENST00000507193 KIF21BO75037 1637 aa15.15■□□□□ 0.02
ABCE1-207ENST00000507193 UBTFP17480 764 aaKnown RBP15.15■□□□□ 0.02
ABCE1-207ENST00000507193 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
ABCE1-207ENST00000507193 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
ABCE1-207ENST00000507193 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
ABCE1-207ENST00000507193 TOP2BQ02880 1626 aa15.02■□□□□ -0
ABCE1-207ENST00000507193 CLIP1P30622 1438 aa15.01□□□□□ -0.01
ABCE1-207ENST00000507193 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
ABCE1-207ENST00000507193 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
ABCE1-207ENST00000507193 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
ABCE1-207ENST00000507193 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
ABCE1-207ENST00000507193 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
ABCE1-207ENST00000507193 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
ABCE1-207ENST00000507193 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
ABCE1-207ENST00000507193 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
ABCE1-207ENST00000507193 PRXQ9BXM0 1461 aa14.86□□□□□ -0.03
ABCE1-207ENST00000507193 APLP2Q06481 763 aa14.84□□□□□ -0.03
ABCE1-207ENST00000507193 CUX1P39880 1505 aa14.83□□□□□ -0.03
ABCE1-207ENST00000507193 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
ABCE1-207ENST00000507193 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
ABCE1-207ENST00000507193 CFTRP13569 1480 aa14.79□□□□□ -0.04
ABCE1-207ENST00000507193 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
ABCE1-207ENST00000507193 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
ABCE1-207ENST00000507193 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
ABCE1-207ENST00000507193 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
ABCE1-207ENST00000507193 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
ABCE1-207ENST00000507193 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
ABCE1-207ENST00000507193 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
ABCE1-207ENST00000507193 CLSPNQ9HAW4 1339 aa14.66□□□□□ -0.06
ABCE1-207ENST00000507193 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
ABCE1-207ENST00000507193 RRBP1Q9P2E9 1410 aaKnown RBP14.65□□□□□ -0.07
ABCE1-207ENST00000507193 KANK4Q5T7N3 995 aaPredicted RBP14.64□□□□□ -0.07
ABCE1-207ENST00000507193 DHX57Q6P158 1386 aaKnown RBP14.62□□□□□ -0.07
ABCE1-207ENST00000507193 CUX2O14529 1486 aa14.59□□□□□ -0.07
ABCE1-207ENST00000507193 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
ABCE1-207ENST00000507193 IGF1RP08069 1367 aa14.58□□□□□ -0.08
ABCE1-207ENST00000507193 MIER1Q8N108 512 aa14.57□□□□□ -0.08
ABCE1-207ENST00000507193 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
ABCE1-207ENST00000507193 MAP3K1Q13233 1512 aa14.55□□□□□ -0.08
ABCE1-207ENST00000507193 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
ABCE1-207ENST00000507193 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
ABCE1-207ENST00000507193 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.09
ABCE1-207ENST00000507193 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
ABCE1-207ENST00000507193 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
ABCE1-207ENST00000507193 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
ABCE1-207ENST00000507193 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
ABCE1-207ENST00000507193 LRRC9Q6ZRR7 1453 aa14.44□□□□□ -0.1
ABCE1-207ENST00000507193 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms