RNA–Protein interactions for RNA: ENST00000506996.5

SNX24-205, Transcript of sorting nexin 24, humanhuman

TSL 1 (best) BASIC

Gene SNX24, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX24-205ENST00000506996 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
SNX24-205ENST00000506996 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
SNX24-205ENST00000506996 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
SNX24-205ENST00000506996 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
SNX24-205ENST00000506996 FOXD1Q16676 465 aa20.16■□□□□ 0.82
SNX24-205ENST00000506996 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
SNX24-205ENST00000506996 ADRA2BP18089 450 aa19.04■□□□□ 0.64
SNX24-205ENST00000506996 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
SNX24-205ENST00000506996 MSH5O43196 834 aa18.88■□□□□ 0.61
SNX24-205ENST00000506996 PIAS4Q8N2W9 510 aaPredicted RBP18.79■□□□□ 0.6
SNX24-205ENST00000506996 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
SNX24-205ENST00000506996 KCNA4P22459 653 aa17.85■□□□□ 0.45
SNX24-205ENST00000506996 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
SNX24-205ENST00000506996 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SNX24-205ENST00000506996 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
SNX24-205ENST00000506996 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
SNX24-205ENST00000506996 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
SNX24-205ENST00000506996 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
SNX24-205ENST00000506996 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
SNX24-205ENST00000506996 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
SNX24-205ENST00000506996 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
SNX24-205ENST00000506996 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
SNX24-205ENST00000506996 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
SNX24-205ENST00000506996 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
SNX24-205ENST00000506996 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
SNX24-205ENST00000506996 ZBTB22O15209 634 aa16.46■□□□□ 0.23
SNX24-205ENST00000506996 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
SNX24-205ENST00000506996 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
SNX24-205ENST00000506996 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
SNX24-205ENST00000506996 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
SNX24-205ENST00000506996 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
SNX24-205ENST00000506996 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
SNX24-205ENST00000506996 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
SNX24-205ENST00000506996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNX24-205ENST00000506996 NISCHQ9Y2I1 1504 aa15.75■□□□□ 0.11
SNX24-205ENST00000506996 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
SNX24-205ENST00000506996 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
SNX24-205ENST00000506996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
SNX24-205ENST00000506996 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
SNX24-205ENST00000506996 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
SNX24-205ENST00000506996 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
SNX24-205ENST00000506996 APLP2Q06481 763 aa15.29■□□□□ 0.04
SNX24-205ENST00000506996 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
SNX24-205ENST00000506996 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SNX24-205ENST00000506996 DSG3P32926 999 aa15.08■□□□□ 0
SNX24-205ENST00000506996 CAPN15O75808 1086 aa15.04■□□□□ -0
SNX24-205ENST00000506996 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
SNX24-205ENST00000506996 FKBP8Q14318 412 aa15□□□□□ -0.01
SNX24-205ENST00000506996 POLA2Q14181 598 aa14.86□□□□□ -0.03
SNX24-205ENST00000506996 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
SNX24-205ENST00000506996 ABCB7O75027 752 aa14.77□□□□□ -0.05
SNX24-205ENST00000506996 FBLN2P98095 1184 aa14.74□□□□□ -0.05
SNX24-205ENST00000506996 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
SNX24-205ENST00000506996 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SNX24-205ENST00000506996 POTEHQ6S545 545 aa14.51□□□□□ -0.09
SNX24-205ENST00000506996 PROM2Q8N271 834 aa14.49□□□□□ -0.09
SNX24-205ENST00000506996 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
SNX24-205ENST00000506996 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
SNX24-205ENST00000506996 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
SNX24-205ENST00000506996 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
SNX24-205ENST00000506996 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
SNX24-205ENST00000506996 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
SNX24-205ENST00000506996 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
SNX24-205ENST00000506996 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
SNX24-205ENST00000506996 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
SNX24-205ENST00000506996 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
SNX24-205ENST00000506996 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
SNX24-205ENST00000506996 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNX24-205ENST00000506996 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
SNX24-205ENST00000506996 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
SNX24-205ENST00000506996 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
SNX24-205ENST00000506996 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
SNX24-205ENST00000506996 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
SNX24-205ENST00000506996 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
SNX24-205ENST00000506996 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
SNX24-205ENST00000506996 MIER1Q8N108 512 aa13.79□□□□□ -0.2
SNX24-205ENST00000506996 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
SNX24-205ENST00000506996 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
SNX24-205ENST00000506996 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
SNX24-205ENST00000506996 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
SNX24-205ENST00000506996 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
SNX24-205ENST00000506996 PKD2Q13563 968 aa13.69□□□□□ -0.22
SNX24-205ENST00000506996 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
SNX24-205ENST00000506996 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNX24-205ENST00000506996 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
SNX24-205ENST00000506996 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
SNX24-205ENST00000506996 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SNX24-205ENST00000506996 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
SNX24-205ENST00000506996 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
SNX24-205ENST00000506996 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
SNX24-205ENST00000506996 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
SNX24-205ENST00000506996 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
SNX24-205ENST00000506996 NUBP1P53384 320 aa13.46□□□□□ -0.25
SNX24-205ENST00000506996 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
SNX24-205ENST00000506996 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
SNX24-205ENST00000506996 ABCC9O60706 1549 aa13.42□□□□□ -0.26
SNX24-205ENST00000506996 HAX1O00165 279 aa13.4□□□□□ -0.26
SNX24-205ENST00000506996 RGL2O15211 777 aa13.39□□□□□ -0.27
SNX24-205ENST00000506996 GSE1Q14687 1217 aa13.37□□□□□ -0.27
SNX24-205ENST00000506996 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms