RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 AEBP2Q6ZN18 517 aaPredicted RBP15.62■□□□□ 0.09
GYPB-207ENST00000506679 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
GYPB-207ENST00000506679 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
GYPB-207ENST00000506679 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
GYPB-207ENST00000506679 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
GYPB-207ENST00000506679 FOXD1Q16676 465 aa12.25□□□□□ -0.45
GYPB-207ENST00000506679 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
GYPB-207ENST00000506679 ADRA2BP18089 450 aa11.82□□□□□ -0.52
GYPB-207ENST00000506679 PIAS4Q8N2W9 510 aaPredicted RBP11.54□□□□□ -0.56
GYPB-207ENST00000506679 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
GYPB-207ENST00000506679 MSH5O43196 834 aa11.26□□□□□ -0.61
GYPB-207ENST00000506679 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
GYPB-207ENST00000506679 KCNA4P22459 653 aa10.81□□□□□ -0.68
GYPB-207ENST00000506679 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
GYPB-207ENST00000506679 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
GYPB-207ENST00000506679 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
GYPB-207ENST00000506679 CNKSR2Q8WXI2 1034 aa10.66□□□□□ -0.7
GYPB-207ENST00000506679 NPM3O75607 178 aaKnown RBP10.57□□□□□ -0.72
GYPB-207ENST00000506679 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
GYPB-207ENST00000506679 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
GYPB-207ENST00000506679 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
GYPB-207ENST00000506679 DNAJC5BQ9UF47 199 aa10.35□□□□□ -0.75
GYPB-207ENST00000506679 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
GYPB-207ENST00000506679 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
GYPB-207ENST00000506679 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
GYPB-207ENST00000506679 ZBTB22O15209 634 aa9.98□□□□□ -0.81
GYPB-207ENST00000506679 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
GYPB-207ENST00000506679 CSRNP3Q8WYN3 585 aa9.97□□□□□ -0.81
GYPB-207ENST00000506679 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
GYPB-207ENST00000506679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.82□□□□□ -0.84
GYPB-207ENST00000506679 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
GYPB-207ENST00000506679 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
GYPB-207ENST00000506679 RNF39Q9H2S5 420 aa9.69□□□□□ -0.86
GYPB-207ENST00000506679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
GYPB-207ENST00000506679 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
GYPB-207ENST00000506679 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
GYPB-207ENST00000506679 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
GYPB-207ENST00000506679 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
GYPB-207ENST00000506679 C1QBPQ07021 282 aaKnown RBP9.55□□□□□ -0.88
GYPB-207ENST00000506679 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
GYPB-207ENST00000506679 APLP2Q06481 763 aa9.47□□□□□ -0.89
GYPB-207ENST00000506679 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
GYPB-207ENST00000506679 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
GYPB-207ENST00000506679 CAPN15O75808 1086 aa9.32□□□□□ -0.92
GYPB-207ENST00000506679 TRHP20396 242 aaPredicted RBP9.3□□□□□ -0.92
GYPB-207ENST00000506679 DSG3P32926 999 aa9.23□□□□□ -0.93
GYPB-207ENST00000506679 POLA2Q14181 598 aa9.2□□□□□ -0.94
GYPB-207ENST00000506679 ABCB7O75027 752 aa9.17□□□□□ -0.94
GYPB-207ENST00000506679 MKRN4PQ13434 485 aaPredicted RBP9.1□□□□□ -0.95
GYPB-207ENST00000506679 ZBTB12Q9Y330 459 aaPredicted RBP9.07□□□□□ -0.96
GYPB-207ENST00000506679 FBLN2P98095 1184 aa9.03□□□□□ -0.96
GYPB-207ENST00000506679 FKBP8Q14318 412 aa8.95□□□□□ -0.98
GYPB-207ENST00000506679 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
GYPB-207ENST00000506679 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
GYPB-207ENST00000506679 SPDYE2BA6NHP3 402 aa8.85□□□□□ -0.99
GYPB-207ENST00000506679 SPDYE6P0CI01 402 aa8.85□□□□□ -0.99
GYPB-207ENST00000506679 SPDYE2Q495Y8 402 aa8.85□□□□□ -0.99
GYPB-207ENST00000506679 PROM2Q8N271 834 aa8.85□□□□□ -0.99
GYPB-207ENST00000506679 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
GYPB-207ENST00000506679 POTEHQ6S545 545 aa8.79□□□□□ -1
GYPB-207ENST00000506679 ZNF692Q9BU19 519 aaPredicted RBP8.78□□□□□ -1
GYPB-207ENST00000506679 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
GYPB-207ENST00000506679 PABPN1Q86U42 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
GYPB-207ENST00000506679 AKT1S1Q96B36 256 aa8.68□□□□□ -1.02
GYPB-207ENST00000506679 FBXO3Q9UK99 471 aa8.62□□□□□ -1.03
GYPB-207ENST00000506679 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
GYPB-207ENST00000506679 STAG3Q9UJ98 1225 aa8.55□□□□□ -1.04
GYPB-207ENST00000506679 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
GYPB-207ENST00000506679 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
GYPB-207ENST00000506679 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
GYPB-207ENST00000506679 CLEC11AQ9Y240 323 aa8.45□□□□□ -1.06
GYPB-207ENST00000506679 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
GYPB-207ENST00000506679 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
GYPB-207ENST00000506679 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
GYPB-207ENST00000506679 CHRDL2Q6WN34 429 aa8.37□□□□□ -1.07
GYPB-207ENST00000506679 MIER1Q8N108 512 aa8.37□□□□□ -1.07
GYPB-207ENST00000506679 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
GYPB-207ENST00000506679 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
GYPB-207ENST00000506679 MNX1P50219 401 aaPredicted RBP8.34□□□□□ -1.07
GYPB-207ENST00000506679 PLEKHG5O94827 1062 aa8.31□□□□□ -1.08
GYPB-207ENST00000506679 AMER1Q5JTC6 1135 aaPredicted RBP8.31□□□□□ -1.08
GYPB-207ENST00000506679 PIP4P2Q8N4L2 257 aa8.3□□□□□ -1.08
GYPB-207ENST00000506679 ZBTB47Q9UFB7 747 aaPredicted RBP8.3□□□□□ -1.08
GYPB-207ENST00000506679 RTN4Q9NQC3 1192 aaKnown RBP8.29□□□□□ -1.08
GYPB-207ENST00000506679 KLHL34Q8N239 644 aa8.28□□□□□ -1.08
GYPB-207ENST00000506679 SPOCK2Q92563 424 aa8.28□□□□□ -1.08
GYPB-207ENST00000506679 CHADLQ6NUI6 762 aa8.27□□□□□ -1.09
GYPB-207ENST00000506679 PRKAR2AP13861 404 aaKnown RBP8.26□□□□□ -1.09
GYPB-207ENST00000506679 NUBP1P53384 320 aa8.24□□□□□ -1.09
GYPB-207ENST00000506679 FARP1Q9Y4F1 1045 aaPredicted RBP8.22□□□□□ -1.09
GYPB-207ENST00000506679 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
GYPB-207ENST00000506679 PKD2Q13563 968 aa8.19□□□□□ -1.1
GYPB-207ENST00000506679 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
GYPB-207ENST00000506679 GSE1Q14687 1217 aa8.12□□□□□ -1.11
GYPB-207ENST00000506679 FAM212AQ96EL1 285 aa8.12□□□□□ -1.11
GYPB-207ENST00000506679 CIZ1Q9ULV3 898 aaPredicted RBP8.09□□□□□ -1.11
GYPB-207ENST00000506679 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
GYPB-207ENST00000506679 TRIM41Q8WV44 630 aa8.08□□□□□ -1.12
GYPB-207ENST00000506679 C19orf67A6NJJ6 358 aa8.06□□□□□ -1.12
GYPB-207ENST00000506679 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms