RNA–Protein interactions for RNA: ENST00000506014.5

LINC00461-205, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-205ENST00000506014 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
LINC00461-205ENST00000506014 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
LINC00461-205ENST00000506014 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
LINC00461-205ENST00000506014 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
LINC00461-205ENST00000506014 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
LINC00461-205ENST00000506014 FOXD1Q16676 465 aa23.2■■□□□ 1.3
LINC00461-205ENST00000506014 ADRA2BP18089 450 aa22.62■■□□□ 1.21
LINC00461-205ENST00000506014 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
LINC00461-205ENST00000506014 PIAS4Q8N2W9 510 aaPredicted RBP22■■□□□ 1.11
LINC00461-205ENST00000506014 MSH5O43196 834 aa21.23■□□□□ 0.99
LINC00461-205ENST00000506014 PPP4R3CPQ6ZMV5 832 aa21.07■□□□□ 0.96
LINC00461-205ENST00000506014 KCNA4P22459 653 aa21■□□□□ 0.95
LINC00461-205ENST00000506014 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
LINC00461-205ENST00000506014 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
LINC00461-205ENST00000506014 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
LINC00461-205ENST00000506014 CNKSR2Q8WXI2 1034 aa20.38■□□□□ 0.85
LINC00461-205ENST00000506014 NPM3O75607 178 aaKnown RBP20.32■□□□□ 0.84
LINC00461-205ENST00000506014 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
LINC00461-205ENST00000506014 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
LINC00461-205ENST00000506014 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
LINC00461-205ENST00000506014 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
LINC00461-205ENST00000506014 HOXD11P31277 338 aaPredicted RBP19.7■□□□□ 0.74
LINC00461-205ENST00000506014 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
LINC00461-205ENST00000506014 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
LINC00461-205ENST00000506014 ZBTB22O15209 634 aa19.33■□□□□ 0.68
LINC00461-205ENST00000506014 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
LINC00461-205ENST00000506014 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
LINC00461-205ENST00000506014 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
LINC00461-205ENST00000506014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
LINC00461-205ENST00000506014 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
LINC00461-205ENST00000506014 MYCNP04198 464 aaPredicted RBP18.76■□□□□ 0.59
LINC00461-205ENST00000506014 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
LINC00461-205ENST00000506014 ATXN8OSP0DMR3 200 aa18.42■□□□□ 0.54
LINC00461-205ENST00000506014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
LINC00461-205ENST00000506014 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
LINC00461-205ENST00000506014 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
LINC00461-205ENST00000506014 ATF5Q9Y2D1 282 aaPredicted RBP18.28■□□□□ 0.52
LINC00461-205ENST00000506014 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
LINC00461-205ENST00000506014 APLP2Q06481 763 aa18.13■□□□□ 0.49
LINC00461-205ENST00000506014 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
LINC00461-205ENST00000506014 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
LINC00461-205ENST00000506014 CAPN15O75808 1086 aa17.92■□□□□ 0.46
LINC00461-205ENST00000506014 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
LINC00461-205ENST00000506014 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
LINC00461-205ENST00000506014 POLA2Q14181 598 aa17.66■□□□□ 0.42
LINC00461-205ENST00000506014 ABCB7O75027 752 aa17.64■□□□□ 0.41
LINC00461-205ENST00000506014 FKBP8Q14318 412 aa17.63■□□□□ 0.41
LINC00461-205ENST00000506014 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
LINC00461-205ENST00000506014 DSG3P32926 999 aa17.48■□□□□ 0.39
LINC00461-205ENST00000506014 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
LINC00461-205ENST00000506014 FBLN2P98095 1184 aa17.46■□□□□ 0.39
LINC00461-205ENST00000506014 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
LINC00461-205ENST00000506014 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
LINC00461-205ENST00000506014 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
LINC00461-205ENST00000506014 PROM2Q8N271 834 aa16.94■□□□□ 0.3
LINC00461-205ENST00000506014 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
LINC00461-205ENST00000506014 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
LINC00461-205ENST00000506014 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
LINC00461-205ENST00000506014 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
LINC00461-205ENST00000506014 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
LINC00461-205ENST00000506014 SSUH2Q9Y2M2 353 aa16.82■□□□□ 0.28
LINC00461-205ENST00000506014 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00461-205ENST00000506014 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
LINC00461-205ENST00000506014 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
LINC00461-205ENST00000506014 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
LINC00461-205ENST00000506014 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
LINC00461-205ENST00000506014 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
LINC00461-205ENST00000506014 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
LINC00461-205ENST00000506014 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
LINC00461-205ENST00000506014 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
LINC00461-205ENST00000506014 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
LINC00461-205ENST00000506014 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
LINC00461-205ENST00000506014 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
LINC00461-205ENST00000506014 MIER1Q8N108 512 aa16.33■□□□□ 0.2
LINC00461-205ENST00000506014 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
LINC00461-205ENST00000506014 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
LINC00461-205ENST00000506014 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
LINC00461-205ENST00000506014 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
LINC00461-205ENST00000506014 SPOCK2Q92563 424 aa16.17■□□□□ 0.18
LINC00461-205ENST00000506014 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
LINC00461-205ENST00000506014 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
LINC00461-205ENST00000506014 PKD2Q13563 968 aa16■□□□□ 0.15
LINC00461-205ENST00000506014 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
LINC00461-205ENST00000506014 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
LINC00461-205ENST00000506014 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
LINC00461-205ENST00000506014 ECM2O94769 699 aaPredicted RBP15.88■□□□□ 0.13
LINC00461-205ENST00000506014 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
LINC00461-205ENST00000506014 NUBP1P53384 320 aa15.85■□□□□ 0.13
LINC00461-205ENST00000506014 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
LINC00461-205ENST00000506014 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
LINC00461-205ENST00000506014 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00461-205ENST00000506014 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00461-205ENST00000506014 DCAF8Q5TAQ9 597 aa15.77■□□□□ 0.12
LINC00461-205ENST00000506014 GSE1Q14687 1217 aa15.75■□□□□ 0.11
LINC00461-205ENST00000506014 RASEFQ8IZ41 740 aa15.74■□□□□ 0.11
LINC00461-205ENST00000506014 FAM212AQ96EL1 285 aa15.74■□□□□ 0.11
LINC00461-205ENST00000506014 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
LINC00461-205ENST00000506014 RGL2O15211 777 aa15.71■□□□□ 0.11
LINC00461-205ENST00000506014 PIP4P2Q8N4L2 257 aa15.71■□□□□ 0.11
LINC00461-205ENST00000506014 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms