RNA–Protein interactions for RNA: ENST00000505214.1

AC055733.3-201, humanhuman

BASIC

Gene AC055733.3, Length 523 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.3-201ENST00000505214 NISCHQ9Y2I1 1504 aa15.7■□□□□ 0.1
AC055733.3-201ENST00000505214 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
AC055733.3-201ENST00000505214 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
AC055733.3-201ENST00000505214 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
AC055733.3-201ENST00000505214 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
AC055733.3-201ENST00000505214 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
AC055733.3-201ENST00000505214 NACADO15069 1562 aa12.63□□□□□ -0.39
AC055733.3-201ENST00000505214 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
AC055733.3-201ENST00000505214 ABCC9O60706 1549 aa12.56□□□□□ -0.4
AC055733.3-201ENST00000505214 SUPT5HO00267 1087 aaKnown RBP12.49□□□□□ -0.41
AC055733.3-201ENST00000505214 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
AC055733.3-201ENST00000505214 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
AC055733.3-201ENST00000505214 RSF1Q96T23 1441 aaPredicted RBP12.23□□□□□ -0.45
AC055733.3-201ENST00000505214 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
AC055733.3-201ENST00000505214 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
AC055733.3-201ENST00000505214 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
AC055733.3-201ENST00000505214 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
AC055733.3-201ENST00000505214 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
AC055733.3-201ENST00000505214 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
AC055733.3-201ENST00000505214 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
AC055733.3-201ENST00000505214 WIZO95785 1651 aa12.02□□□□□ -0.49
AC055733.3-201ENST00000505214 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
AC055733.3-201ENST00000505214 BICRAQ9NZM4 1560 aa11.95□□□□□ -0.5
AC055733.3-201ENST00000505214 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
AC055733.3-201ENST00000505214 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
AC055733.3-201ENST00000505214 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
AC055733.3-201ENST00000505214 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
AC055733.3-201ENST00000505214 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
AC055733.3-201ENST00000505214 EEA1Q15075 1411 aa11.69□□□□□ -0.54
AC055733.3-201ENST00000505214 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
AC055733.3-201ENST00000505214 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
AC055733.3-201ENST00000505214 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
AC055733.3-201ENST00000505214 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
AC055733.3-201ENST00000505214 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
AC055733.3-201ENST00000505214 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
AC055733.3-201ENST00000505214 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
AC055733.3-201ENST00000505214 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
AC055733.3-201ENST00000505214 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
AC055733.3-201ENST00000505214 TRIM26Q12899 539 aaPredicted RBP11.54□□□□□ -0.56
AC055733.3-201ENST00000505214 HRCP23327 699 aa11.53□□□□□ -0.56
AC055733.3-201ENST00000505214 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
AC055733.3-201ENST00000505214 KIF21BO75037 1637 aa11.51□□□□□ -0.57
AC055733.3-201ENST00000505214 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
AC055733.3-201ENST00000505214 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
AC055733.3-201ENST00000505214 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
AC055733.3-201ENST00000505214 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
AC055733.3-201ENST00000505214 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.57
AC055733.3-201ENST00000505214 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
AC055733.3-201ENST00000505214 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
AC055733.3-201ENST00000505214 SOGA1O94964 1423 aa11.4□□□□□ -0.58
AC055733.3-201ENST00000505214 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
AC055733.3-201ENST00000505214 CFTRP13569 1480 aa11.39□□□□□ -0.59
AC055733.3-201ENST00000505214 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
AC055733.3-201ENST00000505214 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
AC055733.3-201ENST00000505214 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
AC055733.3-201ENST00000505214 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
AC055733.3-201ENST00000505214 CUX1P39880 1505 aa11.3□□□□□ -0.6
AC055733.3-201ENST00000505214 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
AC055733.3-201ENST00000505214 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
AC055733.3-201ENST00000505214 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
AC055733.3-201ENST00000505214 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
AC055733.3-201ENST00000505214 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
AC055733.3-201ENST00000505214 CLIP1P30622 1438 aa11.24□□□□□ -0.61
AC055733.3-201ENST00000505214 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
AC055733.3-201ENST00000505214 RAPGEF2Q9Y4G8 1499 aa11.21□□□□□ -0.61
AC055733.3-201ENST00000505214 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
AC055733.3-201ENST00000505214 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
AC055733.3-201ENST00000505214 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
AC055733.3-201ENST00000505214 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
AC055733.3-201ENST00000505214 CUL7Q14999 1698 aa11.14□□□□□ -0.63
AC055733.3-201ENST00000505214 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
AC055733.3-201ENST00000505214 CUX2O14529 1486 aa11.11□□□□□ -0.63
AC055733.3-201ENST00000505214 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
AC055733.3-201ENST00000505214 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
AC055733.3-201ENST00000505214 APLP2Q06481 763 aa11.09□□□□□ -0.63
AC055733.3-201ENST00000505214 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
AC055733.3-201ENST00000505214 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
AC055733.3-201ENST00000505214 MAP3K1Q13233 1512 aa11.06□□□□□ -0.64
AC055733.3-201ENST00000505214 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
AC055733.3-201ENST00000505214 EFCAB5A4FU69 1503 aa11.05□□□□□ -0.64
AC055733.3-201ENST00000505214 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
AC055733.3-201ENST00000505214 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
AC055733.3-201ENST00000505214 IGF1RP08069 1367 aa11.03□□□□□ -0.64
AC055733.3-201ENST00000505214 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
AC055733.3-201ENST00000505214 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
AC055733.3-201ENST00000505214 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
AC055733.3-201ENST00000505214 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
AC055733.3-201ENST00000505214 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
AC055733.3-201ENST00000505214 PPARGC1BQ86YN6 1023 aaKnown RBP11□□□□□ -0.65
AC055733.3-201ENST00000505214 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
AC055733.3-201ENST00000505214 CCER1Q8TC90 406 aaPredicted RBP10.99□□□□□ -0.65
AC055733.3-201ENST00000505214 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
AC055733.3-201ENST00000505214 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
AC055733.3-201ENST00000505214 NESP48681 1621 aa10.95□□□□□ -0.66
AC055733.3-201ENST00000505214 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.66
AC055733.3-201ENST00000505214 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
AC055733.3-201ENST00000505214 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
AC055733.3-201ENST00000505214 THOC2Q8NI27 1593 aaKnown RBP10.93□□□□□ -0.66
AC055733.3-201ENST00000505214 CLSPNQ9HAW4 1339 aa10.92□□□□□ -0.66
AC055733.3-201ENST00000505214 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms