RNA–Protein interactions for RNA: ENST00000504982.1

PAPD4-208, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-208ENST00000504982 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
PAPD4-208ENST00000504982 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
PAPD4-208ENST00000504982 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PAPD4-208ENST00000504982 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
PAPD4-208ENST00000504982 FOXD1Q16676 465 aa16.64■□□□□ 0.25
PAPD4-208ENST00000504982 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
PAPD4-208ENST00000504982 MSH5O43196 834 aa15.67■□□□□ 0.1
PAPD4-208ENST00000504982 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
PAPD4-208ENST00000504982 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
PAPD4-208ENST00000504982 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
PAPD4-208ENST00000504982 ADRA2BP18089 450 aa15.37■□□□□ 0.05
PAPD4-208ENST00000504982 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
PAPD4-208ENST00000504982 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
PAPD4-208ENST00000504982 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
PAPD4-208ENST00000504982 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
PAPD4-208ENST00000504982 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
PAPD4-208ENST00000504982 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
PAPD4-208ENST00000504982 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
PAPD4-208ENST00000504982 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
PAPD4-208ENST00000504982 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
PAPD4-208ENST00000504982 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
PAPD4-208ENST00000504982 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
PAPD4-208ENST00000504982 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
PAPD4-208ENST00000504982 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
PAPD4-208ENST00000504982 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
PAPD4-208ENST00000504982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.344e-6■□□□□ 11.1
PAPD4-208ENST00000504982 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
PAPD4-208ENST00000504982 KCNA4P22459 653 aa12.56□□□□□ -0.4
PAPD4-208ENST00000504982 CAPN15O75808 1086 aa12.48□□□□□ -0.41
PAPD4-208ENST00000504982 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
PAPD4-208ENST00000504982 DSG3P32926 999 aa12.43□□□□□ -0.42
PAPD4-208ENST00000504982 SLC4A2P04920 1241 aa12.39□□□□□ -0.43
PAPD4-208ENST00000504982 APLP2Q06481 763 aa12.31□□□□□ -0.44
PAPD4-208ENST00000504982 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
PAPD4-208ENST00000504982 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
PAPD4-208ENST00000504982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
PAPD4-208ENST00000504982 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
PAPD4-208ENST00000504982 ABCB7O75027 752 aa12.18□□□□□ -0.46
PAPD4-208ENST00000504982 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
PAPD4-208ENST00000504982 POTEHQ6S545 545 aa12.14□□□□□ -0.47
PAPD4-208ENST00000504982 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
PAPD4-208ENST00000504982 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
PAPD4-208ENST00000504982 POLA2Q14181 598 aa11.85□□□□□ -0.51
PAPD4-208ENST00000504982 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
PAPD4-208ENST00000504982 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
PAPD4-208ENST00000504982 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
PAPD4-208ENST00000504982 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
PAPD4-208ENST00000504982 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
PAPD4-208ENST00000504982 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
PAPD4-208ENST00000504982 ZBTB22O15209 634 aa11.55□□□□□ -0.56
PAPD4-208ENST00000504982 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
PAPD4-208ENST00000504982 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
PAPD4-208ENST00000504982 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
PAPD4-208ENST00000504982 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
PAPD4-208ENST00000504982 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
PAPD4-208ENST00000504982 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
PAPD4-208ENST00000504982 FBLN2P98095 1184 aa11.3□□□□□ -0.6
PAPD4-208ENST00000504982 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
PAPD4-208ENST00000504982 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
PAPD4-208ENST00000504982 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
PAPD4-208ENST00000504982 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
PAPD4-208ENST00000504982 HAX1O00165 279 aa11.19□□□□□ -0.62
PAPD4-208ENST00000504982 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
PAPD4-208ENST00000504982 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
PAPD4-208ENST00000504982 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
PAPD4-208ENST00000504982 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
PAPD4-208ENST00000504982 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
PAPD4-208ENST00000504982 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
PAPD4-208ENST00000504982 EVX2Q03828 476 aa11.01□□□□□ -0.65
PAPD4-208ENST00000504982 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
PAPD4-208ENST00000504982 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
PAPD4-208ENST00000504982 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
PAPD4-208ENST00000504982 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
PAPD4-208ENST00000504982 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
PAPD4-208ENST00000504982 GABBR2O75899 941 aa10.78□□□□□ -0.68
PAPD4-208ENST00000504982 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
PAPD4-208ENST00000504982 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
PAPD4-208ENST00000504982 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
PAPD4-208ENST00000504982 LHX8Q68G74 356 aa10.6□□□□□ -0.71
PAPD4-208ENST00000504982 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
PAPD4-208ENST00000504982 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
PAPD4-208ENST00000504982 CLCN6P51797 869 aa10.57□□□□□ -0.72
PAPD4-208ENST00000504982 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
PAPD4-208ENST00000504982 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
PAPD4-208ENST00000504982 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
PAPD4-208ENST00000504982 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
PAPD4-208ENST00000504982 DCBLD2Q96PD2 775 aa10.48□□□□□ -0.73
PAPD4-208ENST00000504982 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
PAPD4-208ENST00000504982 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
PAPD4-208ENST00000504982 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
PAPD4-208ENST00000504982 PHF12Q96QT6 1004 aa10.38□□□□□ -0.75
PAPD4-208ENST00000504982 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
PAPD4-208ENST00000504982 PROM2Q8N271 834 aa10.31□□□□□ -0.76
PAPD4-208ENST00000504982 MS4A3Q96HJ5 214 aa10.23□□□□□ -0.77
PAPD4-208ENST00000504982 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
PAPD4-208ENST00000504982 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
PAPD4-208ENST00000504982 POTEB2H3BUK9 544 aa10.18□□□□□ -0.78
PAPD4-208ENST00000504982 ASTLQ6HA08 431 aaPredicted RBP10.18□□□□□ -0.78
PAPD4-208ENST00000504982 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
PAPD4-208ENST00000504982 METRNQ9UJH8 293 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms