RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
GYPA-204ENST00000504786 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
GYPA-204ENST00000504786 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
GYPA-204ENST00000504786 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
GYPA-204ENST00000504786 FOXD1Q16676 465 aa19.21■□□□□ 0.67
GYPA-204ENST00000504786 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
GYPA-204ENST00000504786 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
GYPA-204ENST00000504786 ADRA2BP18089 450 aa18.22■□□□□ 0.51
GYPA-204ENST00000504786 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
GYPA-204ENST00000504786 MSH5O43196 834 aa17.86■□□□□ 0.45
GYPA-204ENST00000504786 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
GYPA-204ENST00000504786 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
GYPA-204ENST00000504786 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
GYPA-204ENST00000504786 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
GYPA-204ENST00000504786 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
GYPA-204ENST00000504786 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
GYPA-204ENST00000504786 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
GYPA-204ENST00000504786 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
GYPA-204ENST00000504786 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
GYPA-204ENST00000504786 KCNA4P22459 653 aa15.89■□□□□ 0.13
GYPA-204ENST00000504786 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
GYPA-204ENST00000504786 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
GYPA-204ENST00000504786 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
GYPA-204ENST00000504786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
GYPA-204ENST00000504786 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
GYPA-204ENST00000504786 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
GYPA-204ENST00000504786 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
GYPA-204ENST00000504786 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
GYPA-204ENST00000504786 SLC4A2P04920 1241 aa15.04■□□□□ -0
GYPA-204ENST00000504786 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
GYPA-204ENST00000504786 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
GYPA-204ENST00000504786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
GYPA-204ENST00000504786 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
GYPA-204ENST00000504786 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
GYPA-204ENST00000504786 APLP2Q06481 763 aa14.65□□□□□ -0.06
GYPA-204ENST00000504786 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
GYPA-204ENST00000504786 CAPN15O75808 1086 aa14.62□□□□□ -0.07
GYPA-204ENST00000504786 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
GYPA-204ENST00000504786 ZBTB22O15209 634 aa14.58□□□□□ -0.08
GYPA-204ENST00000504786 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
GYPA-204ENST00000504786 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
GYPA-204ENST00000504786 DSG3P32926 999 aa14.41□□□□□ -0.1
GYPA-204ENST00000504786 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
GYPA-204ENST00000504786 ABCB7O75027 752 aa14.29□□□□□ -0.12
GYPA-204ENST00000504786 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
GYPA-204ENST00000504786 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
GYPA-204ENST00000504786 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
GYPA-204ENST00000504786 POLA2Q14181 598 aa14.17□□□□□ -0.14
GYPA-204ENST00000504786 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
GYPA-204ENST00000504786 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
GYPA-204ENST00000504786 FBLN2P98095 1184 aa13.76□□□□□ -0.21
GYPA-204ENST00000504786 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
GYPA-204ENST00000504786 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
GYPA-204ENST00000504786 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
GYPA-204ENST00000504786 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
GYPA-204ENST00000504786 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
GYPA-204ENST00000504786 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
GYPA-204ENST00000504786 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
GYPA-204ENST00000504786 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
GYPA-204ENST00000504786 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
GYPA-204ENST00000504786 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
GYPA-204ENST00000504786 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
GYPA-204ENST00000504786 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
GYPA-204ENST00000504786 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
GYPA-204ENST00000504786 POTEHQ6S545 545 aa13.21□□□□□ -0.29
GYPA-204ENST00000504786 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
GYPA-204ENST00000504786 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
GYPA-204ENST00000504786 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
GYPA-204ENST00000504786 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
GYPA-204ENST00000504786 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
GYPA-204ENST00000504786 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
GYPA-204ENST00000504786 FKBP8Q14318 412 aa12.96□□□□□ -0.33
GYPA-204ENST00000504786 PROM2Q8N271 834 aa12.93□□□□□ -0.34
GYPA-204ENST00000504786 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
GYPA-204ENST00000504786 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
GYPA-204ENST00000504786 HAX1O00165 279 aa12.76□□□□□ -0.37
GYPA-204ENST00000504786 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
GYPA-204ENST00000504786 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
GYPA-204ENST00000504786 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
GYPA-204ENST00000504786 MIER1Q8N108 512 aa12.61□□□□□ -0.39
GYPA-204ENST00000504786 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
GYPA-204ENST00000504786 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
GYPA-204ENST00000504786 EVX2Q03828 476 aa12.57□□□□□ -0.4
GYPA-204ENST00000504786 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
GYPA-204ENST00000504786 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
GYPA-204ENST00000504786 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
GYPA-204ENST00000504786 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
GYPA-204ENST00000504786 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
GYPA-204ENST00000504786 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
GYPA-204ENST00000504786 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
GYPA-204ENST00000504786 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
GYPA-204ENST00000504786 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
GYPA-204ENST00000504786 GABBR2O75899 941 aa12.35□□□□□ -0.43
GYPA-204ENST00000504786 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
GYPA-204ENST00000504786 CLCN6P51797 869 aa12.32□□□□□ -0.44
GYPA-204ENST00000504786 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
GYPA-204ENST00000504786 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
GYPA-204ENST00000504786 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
GYPA-204ENST00000504786 NUBP1P53384 320 aa12.27□□□□□ -0.45
GYPA-204ENST00000504786 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms