RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 VPS13CQ709C8 3753 aa0.04□□□□□ -2.4
GYPA-204ENST00000504786 EYSQ5T1H1 3165 aa0.04□□□□□ -2.4
GYPA-204ENST00000504786 LOC400499M0QZD8 3231 aa0.04□□□□□ -2.4
GYPA-204ENST00000504786 NBEAL1Q6ZS30 2694 aa0.03□□□□□ -2.4
GYPA-204ENST00000504786 MT1XP80297 61 aa0.03□□□□□ -2.4
GYPA-204ENST00000504786 STARD9Q9P2P6 4700 aa0.03□□□□□ -2.4
GYPA-204ENST00000504786 NIPBLQ6KC79 2804 aaeCLIP0.03□□□□□ -2.41
GYPA-204ENST00000504786 LAMA2P24043 3122 aaKnown RBP0.02□□□□□ -2.41
GYPA-204ENST00000504786 MYO15AQ9UKN7 3530 aa0.02□□□□□ -2.41
GYPA-204ENST00000504786 BOD1L1Q8NFC6 3051 aa0.02□□□□□ -2.41
GYPA-204ENST00000504786 KMT2CQ8NEZ4 4911 aaKnown RBP0.02□□□□□ -2.41
GYPA-204ENST00000504786 CEP350Q5VT06 3117 aa0.02□□□□□ -2.41
GYPA-204ENST00000504786 TLN1Q9Y490 2541 aaKnown RBP0.02□□□□□ -2.41
GYPA-204ENST00000504786 WDFY4Q6ZS81 3184 aa0.02□□□□□ -2.41
GYPA-204ENST00000504786 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
GYPA-204ENST00000504786 DEFB4AO15263 64 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 CD52P31358 61 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 LINC01556Q5JQF7 62 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 CFAP46Q8IYW2 2715 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 DNHD1Q96M86 4753 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 PCLOQ9Y6V0 5065 aa0.01□□□□□ -2.41
GYPA-204ENST00000504786 ITPR2Q14571 2701 aa0□□□□□ -2.41
GYPA-204ENST00000504786 PCNTO95613 3336 aa0□□□□□ -2.41
GYPA-204ENST00000504786 KRTAP19-8Q3LI54 63 aa0□□□□□ -2.41
GYPA-204ENST00000504786 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
GYPA-204ENST00000504786 SSPOA2VEC9 5147 aa-0□□□□□ -2.41
GYPA-204ENST00000504786 MYO9AB2RTY4 2548 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 CFAP47Q6ZTR5 3102 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 A0A096LPF7 62 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 Q9Y3F1 56 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 RYR1P21817 5038 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 SPEGQ15772 3267 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 ASPMQ8IZT6 3477 aa-0.01□□□□□ -2.41
GYPA-204ENST00000504786 CENPEQ02224 2701 aa-0.02□□□□□ -2.41
GYPA-204ENST00000504786 CEP295Q9C0D2 2601 aa-0.02□□□□□ -2.41
GYPA-204ENST00000504786 USP34Q70CQ2 3546 aa-0.03□□□□□ -2.41
GYPA-204ENST00000504786 MT2AP02795 61 aa-0.03□□□□□ -2.41
GYPA-204ENST00000504786 MT1GP13640 62 aa-0.03□□□□□ -2.41
GYPA-204ENST00000504786 MT1MQ8N339 61 aa-0.03□□□□□ -2.41
GYPA-204ENST00000504786 EP400Q96L91 3159 aa-0.03□□□□□ -2.41
GYPA-204ENST00000504786 UNC80Q8N2C7 3258 aa-0.04□□□□□ -2.42
GYPA-204ENST00000504786 MT1HL1P0DM35 61 aa-0.04□□□□□ -2.42
GYPA-204ENST00000504786 MT4P47944 62 aa-0.04□□□□□ -2.42
GYPA-204ENST00000504786 VCANP13611 3396 aa-0.04□□□□□ -2.42
GYPA-204ENST00000504786 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
GYPA-204ENST00000504786 GOLGB1Q14789 3259 aaKnown RBP-0.04□□□□□ -2.42
GYPA-204ENST00000504786 UBR4Q5T4S7 5183 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 RYR3Q15413 4870 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 HERC2O95714 4834 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 USH2AO75445 5202 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 BIRC6Q9NR09 4857 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 STATHP02808 62 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 DEFB108BQ8NET1 73 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 UTRNP46939 3433 aa-0.05□□□□□ -2.42
GYPA-204ENST00000504786 KRTAP20-2Q3LI61 65 aa-0.06□□□□□ -2.42
GYPA-204ENST00000504786 COX14Q96I36 57 aa-0.06□□□□□ -2.42
GYPA-204ENST00000504786 VPS13AQ96RL7 3174 aa-0.06□□□□□ -2.42
GYPA-204ENST00000504786 BRCA2P51587 3418 aa-0.06□□□□□ -2.42
GYPA-204ENST00000504786 WDFY3Q8IZQ1 3526 aa-0.07□□□□□ -2.42
GYPA-204ENST00000504786 CENPFP49454 3210 aa-0.08□□□□□ -2.42
GYPA-204ENST00000504786 HTN3P15516 51 aa-0.08□□□□□ -2.42
GYPA-204ENST00000504786 MT1BP07438 61 aa-0.09□□□□□ -2.42
GYPA-204ENST00000504786 MUC12Q9UKN1 5478 aa-0.09□□□□□ -2.42
GYPA-204ENST00000504786 MT1FP04733 61 aa-0.1□□□□□ -2.43
GYPA-204ENST00000504786 KRTAP19-2Q3LHN2 52 aa-0.1□□□□□ -2.43
GYPA-204ENST00000504786 HYDINQ4G0P3 5121 aa-0.11□□□□□ -2.43
GYPA-204ENST00000504786 DNAH14Q0VDD8 3507 aa-0.12□□□□□ -2.43
GYPA-204ENST00000504786 DSTQ03001 7570 aaKnown RBP-0.12□□□□□ -2.43
GYPA-204ENST00000504786 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
GYPA-204ENST00000504786 EPPK1P58107 5090 aaKnown RBP-0.12□□□□□ -2.43
GYPA-204ENST00000504786 RYR2Q92736 4967 aa-0.13□□□□□ -2.43
GYPA-204ENST00000504786 KIAA1109Q2LD37 5005 aa-0.15□□□□□ -2.43
GYPA-204ENST00000504786 CDH23Q9H251 3354 aa-0.15□□□□□ -2.43
GYPA-204ENST00000504786 ABCA13Q86UQ4 5058 aa-0.2□□□□□ -2.44
GYPA-204ENST00000504786 KRTAP20-1Q3LI63 56 aa-0.21□□□□□ -2.44
GYPA-204ENST00000504786 KRTAP19-6Q3LI70 58 aa-0.24□□□□□ -2.45
GYPA-204ENST00000504786 NEBP20929 6669 aa-0.26□□□□□ -2.45
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms