RNA–Protein interactions for RNA: ENST00000503799.5

CLDND1-210, Transcript of claudin domain containing 1, humanhuman

TSL 5

Gene CLDND1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-210ENST00000503799 AEBP2Q6ZN18 517 aaPredicted RBP20.15■□□□□ 0.82
CLDND1-210ENST00000503799 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
CLDND1-210ENST00000503799 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-210ENST00000503799 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-210ENST00000503799 FOXD1Q16676 465 aa16.05■□□□□ 0.16
CLDND1-210ENST00000503799 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
CLDND1-210ENST00000503799 MSH5O43196 834 aa15.07■□□□□ 0
CLDND1-210ENST00000503799 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
CLDND1-210ENST00000503799 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
CLDND1-210ENST00000503799 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
CLDND1-210ENST00000503799 ADRA2BP18089 450 aa14.87□□□□□ -0.03
CLDND1-210ENST00000503799 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-210ENST00000503799 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
CLDND1-210ENST00000503799 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
CLDND1-210ENST00000503799 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
CLDND1-210ENST00000503799 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-210ENST00000503799 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
CLDND1-210ENST00000503799 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
CLDND1-210ENST00000503799 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
CLDND1-210ENST00000503799 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-210ENST00000503799 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
CLDND1-210ENST00000503799 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
CLDND1-210ENST00000503799 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
CLDND1-210ENST00000503799 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
CLDND1-210ENST00000503799 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
CLDND1-210ENST00000503799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLDND1-210ENST00000503799 KCNA4P22459 653 aa12.21□□□□□ -0.45
CLDND1-210ENST00000503799 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
CLDND1-210ENST00000503799 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CLDND1-210ENST00000503799 CAPN15O75808 1086 aa12.04□□□□□ -0.48
CLDND1-210ENST00000503799 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
CLDND1-210ENST00000503799 DSG3P32926 999 aa11.99□□□□□ -0.49
CLDND1-210ENST00000503799 APLP2Q06481 763 aa11.84□□□□□ -0.51
CLDND1-210ENST00000503799 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
CLDND1-210ENST00000503799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
CLDND1-210ENST00000503799 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
CLDND1-210ENST00000503799 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-210ENST00000503799 ABCB7O75027 752 aa11.75□□□□□ -0.53
CLDND1-210ENST00000503799 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-210ENST00000503799 POTEHQ6S545 545 aa11.66□□□□□ -0.54
CLDND1-210ENST00000503799 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
CLDND1-210ENST00000503799 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
CLDND1-210ENST00000503799 POLA2Q14181 598 aa11.47□□□□□ -0.57
CLDND1-210ENST00000503799 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
CLDND1-210ENST00000503799 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
CLDND1-210ENST00000503799 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-210ENST00000503799 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
CLDND1-210ENST00000503799 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-210ENST00000503799 ZBTB22O15209 634 aa11.22□□□□□ -0.61
CLDND1-210ENST00000503799 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
CLDND1-210ENST00000503799 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
CLDND1-210ENST00000503799 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CLDND1-210ENST00000503799 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
CLDND1-210ENST00000503799 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
CLDND1-210ENST00000503799 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
CLDND1-210ENST00000503799 FBLN2P98095 1184 aa10.91□□□□□ -0.66
CLDND1-210ENST00000503799 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
CLDND1-210ENST00000503799 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
CLDND1-210ENST00000503799 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
CLDND1-210ENST00000503799 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
CLDND1-210ENST00000503799 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLDND1-210ENST00000503799 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-210ENST00000503799 HAX1O00165 279 aa10.78□□□□□ -0.68
CLDND1-210ENST00000503799 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
CLDND1-210ENST00000503799 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
CLDND1-210ENST00000503799 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
CLDND1-210ENST00000503799 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.69
CLDND1-210ENST00000503799 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
CLDND1-210ENST00000503799 EVX2Q03828 476 aa10.63□□□□□ -0.71
CLDND1-210ENST00000503799 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
CLDND1-210ENST00000503799 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLDND1-210ENST00000503799 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
CLDND1-210ENST00000503799 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
CLDND1-210ENST00000503799 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
CLDND1-210ENST00000503799 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
CLDND1-210ENST00000503799 GABBR2O75899 941 aa10.39□□□□□ -0.75
CLDND1-210ENST00000503799 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-210ENST00000503799 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
CLDND1-210ENST00000503799 SPDYE4A6NLX3 237 aa10.25□□□□□ -0.77
CLDND1-210ENST00000503799 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
CLDND1-210ENST00000503799 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
CLDND1-210ENST00000503799 CLCN6P51797 869 aa10.19□□□□□ -0.78
CLDND1-210ENST00000503799 LHX8Q68G74 356 aa10.19□□□□□ -0.78
CLDND1-210ENST00000503799 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
CLDND1-210ENST00000503799 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
CLDND1-210ENST00000503799 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
CLDND1-210ENST00000503799 DCBLD2Q96PD2 775 aa10.09□□□□□ -0.79
CLDND1-210ENST00000503799 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-210ENST00000503799 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-210ENST00000503799 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-210ENST00000503799 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLDND1-210ENST00000503799 PHF12Q96QT6 1004 aa10□□□□□ -0.81
CLDND1-210ENST00000503799 PROM2Q8N271 834 aa9.99□□□□□ -0.81
CLDND1-210ENST00000503799 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
CLDND1-210ENST00000503799 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
CLDND1-210ENST00000503799 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
CLDND1-210ENST00000503799 PELP1Q8IZL8 1130 aaKnown RBP9.84□□□□□ -0.83
CLDND1-210ENST00000503799 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
CLDND1-210ENST00000503799 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
CLDND1-210ENST00000503799 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms