RNA–Protein interactions for RNA: ENST00000503234.5

PLXNA1-202, Transcript of plexin A1, humanhuman

TSL 2

Gene PLXNA1, Length 4,446 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-202ENST00000503234 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
PLXNA1-202ENST00000503234 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
PLXNA1-202ENST00000503234 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
PLXNA1-202ENST00000503234 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
PLXNA1-202ENST00000503234 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
PLXNA1-202ENST00000503234 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
PLXNA1-202ENST00000503234 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
PLXNA1-202ENST00000503234 ABCC9O60706 1549 aa22.57■■□□□ 1.2
PLXNA1-202ENST00000503234 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
PLXNA1-202ENST00000503234 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
PLXNA1-202ENST00000503234 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
PLXNA1-202ENST00000503234 HRCP23327 699 aa22.33■■□□□ 1.17
PLXNA1-202ENST00000503234 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
PLXNA1-202ENST00000503234 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
PLXNA1-202ENST00000503234 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.14
PLXNA1-202ENST00000503234 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
PLXNA1-202ENST00000503234 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
PLXNA1-202ENST00000503234 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
PLXNA1-202ENST00000503234 NACADO15069 1562 aa21.98■■□□□ 1.11
PLXNA1-202ENST00000503234 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
PLXNA1-202ENST00000503234 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
PLXNA1-202ENST00000503234 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
PLXNA1-202ENST00000503234 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
PLXNA1-202ENST00000503234 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
PLXNA1-202ENST00000503234 APLP2Q06481 763 aa21.74■■□□□ 1.07
PLXNA1-202ENST00000503234 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
PLXNA1-202ENST00000503234 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
PLXNA1-202ENST00000503234 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
PLXNA1-202ENST00000503234 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
PLXNA1-202ENST00000503234 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
PLXNA1-202ENST00000503234 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
PLXNA1-202ENST00000503234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
PLXNA1-202ENST00000503234 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
PLXNA1-202ENST00000503234 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
PLXNA1-202ENST00000503234 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
PLXNA1-202ENST00000503234 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
PLXNA1-202ENST00000503234 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
PLXNA1-202ENST00000503234 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
PLXNA1-202ENST00000503234 WIZO95785 1651 aa20.91■□□□□ 0.94
PLXNA1-202ENST00000503234 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
PLXNA1-202ENST00000503234 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
PLXNA1-202ENST00000503234 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
PLXNA1-202ENST00000503234 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
PLXNA1-202ENST00000503234 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
PLXNA1-202ENST00000503234 ITGAEP38570 1179 aa20.75■□□□□ 0.91
PLXNA1-202ENST00000503234 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
PLXNA1-202ENST00000503234 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
PLXNA1-202ENST00000503234 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
PLXNA1-202ENST00000503234 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
PLXNA1-202ENST00000503234 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
PLXNA1-202ENST00000503234 MYT1Q01538 1121 aa20.66■□□□□ 0.9
PLXNA1-202ENST00000503234 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
PLXNA1-202ENST00000503234 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
PLXNA1-202ENST00000503234 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
PLXNA1-202ENST00000503234 NEFLP07196 543 aa20.54■□□□□ 0.88
PLXNA1-202ENST00000503234 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
PLXNA1-202ENST00000503234 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
PLXNA1-202ENST00000503234 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
PLXNA1-202ENST00000503234 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
PLXNA1-202ENST00000503234 EEA1Q15075 1411 aa20.42■□□□□ 0.86
PLXNA1-202ENST00000503234 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
PLXNA1-202ENST00000503234 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
PLXNA1-202ENST00000503234 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
PLXNA1-202ENST00000503234 EIF4G1Q04637 1599 aaKnown RBP20.35■□□□□ 0.85
PLXNA1-202ENST00000503234 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
PLXNA1-202ENST00000503234 CLIP1P30622 1438 aa20.3■□□□□ 0.84
PLXNA1-202ENST00000503234 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
PLXNA1-202ENST00000503234 ERICH6Q7L0X2 663 aa20.27■□□□□ 0.84
PLXNA1-202ENST00000503234 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
PLXNA1-202ENST00000503234 SOGA1O94964 1423 aa20.22■□□□□ 0.83
PLXNA1-202ENST00000503234 MIER1Q8N108 512 aa20.19■□□□□ 0.82
PLXNA1-202ENST00000503234 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
PLXNA1-202ENST00000503234 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.82
PLXNA1-202ENST00000503234 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
PLXNA1-202ENST00000503234 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
PLXNA1-202ENST00000503234 KIF27Q86VH2 1401 aa20.08■□□□□ 0.81
PLXNA1-202ENST00000503234 ANP32CO43423 234 aa20.04■□□□□ 0.8
PLXNA1-202ENST00000503234 BCANQ96GW7 911 aa20.03■□□□□ 0.8
PLXNA1-202ENST00000503234 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
PLXNA1-202ENST00000503234 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
PLXNA1-202ENST00000503234 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
PLXNA1-202ENST00000503234 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
PLXNA1-202ENST00000503234 CFTRP13569 1480 aa19.94■□□□□ 0.78
PLXNA1-202ENST00000503234 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
PLXNA1-202ENST00000503234 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
PLXNA1-202ENST00000503234 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
PLXNA1-202ENST00000503234 CUX2O14529 1486 aa19.9■□□□□ 0.78
PLXNA1-202ENST00000503234 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
PLXNA1-202ENST00000503234 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
PLXNA1-202ENST00000503234 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
PLXNA1-202ENST00000503234 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
PLXNA1-202ENST00000503234 TONSLQ96HA7 1378 aa19.81■□□□□ 0.76
PLXNA1-202ENST00000503234 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
PLXNA1-202ENST00000503234 FKBP8Q14318 412 aa19.78■□□□□ 0.76
PLXNA1-202ENST00000503234 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
PLXNA1-202ENST00000503234 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
PLXNA1-202ENST00000503234 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
PLXNA1-202ENST00000503234 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
PLXNA1-202ENST00000503234 CUX1P39880 1505 aa19.71■□□□□ 0.75
PLXNA1-202ENST00000503234 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms