RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.43
SH3TC1-206ENST00000502669 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.85
SH3TC1-206ENST00000502669 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
SH3TC1-206ENST00000502669 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
SH3TC1-206ENST00000502669 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
SH3TC1-206ENST00000502669 CCDC180Q9P1Z9 1646 aa25.31■■□□□ 1.64
SH3TC1-206ENST00000502669 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
SH3TC1-206ENST00000502669 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
SH3TC1-206ENST00000502669 PCGF6Q9BYE7 350 aa24.64■■□□□ 1.54
SH3TC1-206ENST00000502669 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
SH3TC1-206ENST00000502669 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
SH3TC1-206ENST00000502669 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
SH3TC1-206ENST00000502669 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
SH3TC1-206ENST00000502669 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
SH3TC1-206ENST00000502669 ABCC9O60706 1549 aa24.31■■□□□ 1.48
SH3TC1-206ENST00000502669 HRCP23327 699 aa24.26■■□□□ 1.47
SH3TC1-206ENST00000502669 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
SH3TC1-206ENST00000502669 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
SH3TC1-206ENST00000502669 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
SH3TC1-206ENST00000502669 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
SH3TC1-206ENST00000502669 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
SH3TC1-206ENST00000502669 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
SH3TC1-206ENST00000502669 NACADO15069 1562 aa23.65■■□□□ 1.38
SH3TC1-206ENST00000502669 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
SH3TC1-206ENST00000502669 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
SH3TC1-206ENST00000502669 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
SH3TC1-206ENST00000502669 WIZO95785 1651 aa23.43■■□□□ 1.34
SH3TC1-206ENST00000502669 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.32
SH3TC1-206ENST00000502669 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
SH3TC1-206ENST00000502669 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
SH3TC1-206ENST00000502669 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
SH3TC1-206ENST00000502669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
SH3TC1-206ENST00000502669 RANGAP1P46060 587 aaPredicted RBP23.17■■□□□ 1.3
SH3TC1-206ENST00000502669 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
SH3TC1-206ENST00000502669 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
SH3TC1-206ENST00000502669 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
SH3TC1-206ENST00000502669 SOGA1O94964 1423 aa22.95■■□□□ 1.27
SH3TC1-206ENST00000502669 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
SH3TC1-206ENST00000502669 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
SH3TC1-206ENST00000502669 APLP2Q06481 763 aa22.84■■□□□ 1.25
SH3TC1-206ENST00000502669 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
SH3TC1-206ENST00000502669 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
SH3TC1-206ENST00000502669 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
SH3TC1-206ENST00000502669 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
SH3TC1-206ENST00000502669 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
SH3TC1-206ENST00000502669 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
SH3TC1-206ENST00000502669 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
SH3TC1-206ENST00000502669 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
SH3TC1-206ENST00000502669 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
SH3TC1-206ENST00000502669 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
SH3TC1-206ENST00000502669 EEA1Q15075 1411 aa22.6■■□□□ 1.21
SH3TC1-206ENST00000502669 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
SH3TC1-206ENST00000502669 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
SH3TC1-206ENST00000502669 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
SH3TC1-206ENST00000502669 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
SH3TC1-206ENST00000502669 CLIP1P30622 1438 aa22.49■■□□□ 1.19
SH3TC1-206ENST00000502669 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
SH3TC1-206ENST00000502669 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
SH3TC1-206ENST00000502669 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
SH3TC1-206ENST00000502669 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
SH3TC1-206ENST00000502669 ITGAEP38570 1179 aa22.36■■□□□ 1.17
SH3TC1-206ENST00000502669 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
SH3TC1-206ENST00000502669 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
SH3TC1-206ENST00000502669 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
SH3TC1-206ENST00000502669 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
SH3TC1-206ENST00000502669 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
SH3TC1-206ENST00000502669 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
SH3TC1-206ENST00000502669 VPS8Q8N3P4 1428 aa22.22■■□□□ 1.15
SH3TC1-206ENST00000502669 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
SH3TC1-206ENST00000502669 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
SH3TC1-206ENST00000502669 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
SH3TC1-206ENST00000502669 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
SH3TC1-206ENST00000502669 KIF21BO75037 1637 aa22.09■■□□□ 1.13
SH3TC1-206ENST00000502669 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
SH3TC1-206ENST00000502669 MIER1Q8N108 512 aa22.04■■□□□ 1.12
SH3TC1-206ENST00000502669 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
SH3TC1-206ENST00000502669 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
SH3TC1-206ENST00000502669 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
SH3TC1-206ENST00000502669 MYT1Q01538 1121 aa21.93■■□□□ 1.1
SH3TC1-206ENST00000502669 CUX2O14529 1486 aa21.93■■□□□ 1.1
SH3TC1-206ENST00000502669 CUX1P39880 1505 aa21.92■■□□□ 1.1
SH3TC1-206ENST00000502669 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
SH3TC1-206ENST00000502669 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
SH3TC1-206ENST00000502669 CFTRP13569 1480 aa21.83■■□□□ 1.08
SH3TC1-206ENST00000502669 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
SH3TC1-206ENST00000502669 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
SH3TC1-206ENST00000502669 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
SH3TC1-206ENST00000502669 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.08
SH3TC1-206ENST00000502669 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
SH3TC1-206ENST00000502669 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
SH3TC1-206ENST00000502669 IGF1RP08069 1367 aa21.75■■□□□ 1.07
SH3TC1-206ENST00000502669 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
SH3TC1-206ENST00000502669 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
SH3TC1-206ENST00000502669 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
SH3TC1-206ENST00000502669 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
SH3TC1-206ENST00000502669 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
SH3TC1-206ENST00000502669 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
SH3TC1-206ENST00000502669 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
SH3TC1-206ENST00000502669 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
SH3TC1-206ENST00000502669 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms