RNA–Protein interactions for RNA: ENST00000501855.6

LINC00847-201, long intergenic non-protein coding RNA 847, humanhuman

TSL 1 (best) BASIC

Gene LINC00847, Length 1,871 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00847-201ENST00000501855 NISCHQ9Y2I1 1504 aa36.14■■■■□ 3.38
LINC00847-201ENST00000501855 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
LINC00847-201ENST00000501855 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
LINC00847-201ENST00000501855 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
LINC00847-201ENST00000501855 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
LINC00847-201ENST00000501855 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
LINC00847-201ENST00000501855 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
LINC00847-201ENST00000501855 ABCC9O60706 1549 aa29.03■■■□□ 2.24
LINC00847-201ENST00000501855 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
LINC00847-201ENST00000501855 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
LINC00847-201ENST00000501855 SCRIBQ14160 1630 aa28.76■■■□□ 2.19
LINC00847-201ENST00000501855 NACADO15069 1562 aa28.58■■■□□ 2.16
LINC00847-201ENST00000501855 RSF1Q96T23 1441 aaPredicted RBP28.46■■■□□ 2.15
LINC00847-201ENST00000501855 RB1CC1Q8TDY2 1594 aa28.29■■■□□ 2.12
LINC00847-201ENST00000501855 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
LINC00847-201ENST00000501855 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
LINC00847-201ENST00000501855 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
LINC00847-201ENST00000501855 WIZO95785 1651 aa27.89■■■□□ 2.06
LINC00847-201ENST00000501855 HRCP23327 699 aa27.87■■■□□ 2.05
LINC00847-201ENST00000501855 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
LINC00847-201ENST00000501855 PCGF6Q9BYE7 350 aa27.79■■■□□ 2.04
LINC00847-201ENST00000501855 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
LINC00847-201ENST00000501855 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
LINC00847-201ENST00000501855 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
LINC00847-201ENST00000501855 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
LINC00847-201ENST00000501855 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
LINC00847-201ENST00000501855 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
LINC00847-201ENST00000501855 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
LINC00847-201ENST00000501855 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
LINC00847-201ENST00000501855 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
LINC00847-201ENST00000501855 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
LINC00847-201ENST00000501855 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
LINC00847-201ENST00000501855 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
LINC00847-201ENST00000501855 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
LINC00847-201ENST00000501855 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
LINC00847-201ENST00000501855 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
LINC00847-201ENST00000501855 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
LINC00847-201ENST00000501855 EEA1Q15075 1411 aa26.87■■□□□ 1.89
LINC00847-201ENST00000501855 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
LINC00847-201ENST00000501855 SOGA1O94964 1423 aa26.81■■□□□ 1.88
LINC00847-201ENST00000501855 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
LINC00847-201ENST00000501855 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
LINC00847-201ENST00000501855 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
LINC00847-201ENST00000501855 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.86
LINC00847-201ENST00000501855 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
LINC00847-201ENST00000501855 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
LINC00847-201ENST00000501855 CSRNP3Q8WYN3 585 aa26.65■■□□□ 1.86
LINC00847-201ENST00000501855 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
LINC00847-201ENST00000501855 KIF21BO75037 1637 aa26.55■■□□□ 1.84
LINC00847-201ENST00000501855 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
LINC00847-201ENST00000501855 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
LINC00847-201ENST00000501855 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
LINC00847-201ENST00000501855 UBTFP17480 764 aaKnown RBP26.42■■□□□ 1.82
LINC00847-201ENST00000501855 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
LINC00847-201ENST00000501855 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
LINC00847-201ENST00000501855 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
LINC00847-201ENST00000501855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.24■■□□□ 1.79
LINC00847-201ENST00000501855 CLIP1P30622 1438 aa26.22■■□□□ 1.79
LINC00847-201ENST00000501855 RAPGEF2Q9Y4G8 1499 aa26.22■■□□□ 1.79
LINC00847-201ENST00000501855 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
LINC00847-201ENST00000501855 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
LINC00847-201ENST00000501855 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
LINC00847-201ENST00000501855 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
LINC00847-201ENST00000501855 PRDM2Q13029 1718 aa26.13■■□□□ 1.77
LINC00847-201ENST00000501855 CUX1P39880 1505 aa26.12■■□□□ 1.77
LINC00847-201ENST00000501855 CFTRP13569 1480 aa26.1■■□□□ 1.77
LINC00847-201ENST00000501855 PRXQ9BXM0 1461 aa26.07■■□□□ 1.76
LINC00847-201ENST00000501855 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
LINC00847-201ENST00000501855 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
LINC00847-201ENST00000501855 APLP2Q06481 763 aa25.84■■□□□ 1.73
LINC00847-201ENST00000501855 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
LINC00847-201ENST00000501855 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
LINC00847-201ENST00000501855 RANGAP1P46060 587 aaPredicted RBP25.74■■□□□ 1.71
LINC00847-201ENST00000501855 HNRNPUL2Q1KMD3 747 aaKnown RBP25.72■■□□□ 1.71
LINC00847-201ENST00000501855 CUX2O14529 1486 aa25.68■■□□□ 1.7
LINC00847-201ENST00000501855 ARHGAP35Q9NRY4 1499 aa25.66■■□□□ 1.7
LINC00847-201ENST00000501855 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
LINC00847-201ENST00000501855 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
LINC00847-201ENST00000501855 IGF1RP08069 1367 aa25.63■■□□□ 1.69
LINC00847-201ENST00000501855 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
LINC00847-201ENST00000501855 RRBP1Q9P2E9 1410 aaKnown RBP25.55■■□□□ 1.68
LINC00847-201ENST00000501855 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
LINC00847-201ENST00000501855 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
LINC00847-201ENST00000501855 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
LINC00847-201ENST00000501855 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.68
LINC00847-201ENST00000501855 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
LINC00847-201ENST00000501855 MAP3K1Q13233 1512 aa25.48■■□□□ 1.67
LINC00847-201ENST00000501855 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
LINC00847-201ENST00000501855 TIAM1Q13009 1591 aa25.43■■□□□ 1.66
LINC00847-201ENST00000501855 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
LINC00847-201ENST00000501855 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
LINC00847-201ENST00000501855 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
LINC00847-201ENST00000501855 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
LINC00847-201ENST00000501855 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.65
LINC00847-201ENST00000501855 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
LINC00847-201ENST00000501855 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
LINC00847-201ENST00000501855 NESP48681 1621 aa25.35■■□□□ 1.65
LINC00847-201ENST00000501855 CUL7Q14999 1698 aa25.35■■□□□ 1.65
LINC00847-201ENST00000501855 CFAP43Q8NDM7 1665 aa25.35■■□□□ 1.65
LINC00847-201ENST00000501855 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms