RNA–Protein interactions for RNA: ENST00000498238.1

RSRP1-207, Transcript of arginine and serine rich protein 1, humanhuman

TSL 2

Gene RSRP1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-207ENST00000498238 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
RSRP1-207ENST00000498238 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
RSRP1-207ENST00000498238 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
RSRP1-207ENST00000498238 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
RSRP1-207ENST00000498238 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
RSRP1-207ENST00000498238 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
RSRP1-207ENST00000498238 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
RSRP1-207ENST00000498238 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
RSRP1-207ENST00000498238 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
RSRP1-207ENST00000498238 ABCC9O60706 1549 aa20.98■□□□□ 0.95
RSRP1-207ENST00000498238 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
RSRP1-207ENST00000498238 NACADO15069 1562 aa20.78■□□□□ 0.92
RSRP1-207ENST00000498238 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
RSRP1-207ENST00000498238 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.9
RSRP1-207ENST00000498238 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
RSRP1-207ENST00000498238 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
RSRP1-207ENST00000498238 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
RSRP1-207ENST00000498238 HRCP23327 699 aa20.45■□□□□ 0.86
RSRP1-207ENST00000498238 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
RSRP1-207ENST00000498238 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
RSRP1-207ENST00000498238 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
RSRP1-207ENST00000498238 WIZO95785 1651 aa20.32■□□□□ 0.84
RSRP1-207ENST00000498238 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
RSRP1-207ENST00000498238 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
RSRP1-207ENST00000498238 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
RSRP1-207ENST00000498238 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
RSRP1-207ENST00000498238 MYT1Q01538 1121 aa20.08■□□□□ 0.8
RSRP1-207ENST00000498238 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
RSRP1-207ENST00000498238 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
RSRP1-207ENST00000498238 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
RSRP1-207ENST00000498238 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
RSRP1-207ENST00000498238 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
RSRP1-207ENST00000498238 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
RSRP1-207ENST00000498238 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
RSRP1-207ENST00000498238 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
RSRP1-207ENST00000498238 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
RSRP1-207ENST00000498238 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.764e-9■■■□□ 17.7
RSRP1-207ENST00000498238 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
RSRP1-207ENST00000498238 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
RSRP1-207ENST00000498238 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
RSRP1-207ENST00000498238 SOGA1O94964 1423 aa19.57■□□□□ 0.72
RSRP1-207ENST00000498238 EEA1Q15075 1411 aa19.55■□□□□ 0.72
RSRP1-207ENST00000498238 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
RSRP1-207ENST00000498238 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
RSRP1-207ENST00000498238 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
RSRP1-207ENST00000498238 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
RSRP1-207ENST00000498238 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
RSRP1-207ENST00000498238 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
RSRP1-207ENST00000498238 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
RSRP1-207ENST00000498238 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
RSRP1-207ENST00000498238 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
RSRP1-207ENST00000498238 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
RSRP1-207ENST00000498238 KIF21BO75037 1637 aa19.3■□□□□ 0.68
RSRP1-207ENST00000498238 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
RSRP1-207ENST00000498238 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
RSRP1-207ENST00000498238 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
RSRP1-207ENST00000498238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
RSRP1-207ENST00000498238 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
RSRP1-207ENST00000498238 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
RSRP1-207ENST00000498238 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
RSRP1-207ENST00000498238 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
RSRP1-207ENST00000498238 CLIP1P30622 1438 aa19.13■□□□□ 0.65
RSRP1-207ENST00000498238 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
RSRP1-207ENST00000498238 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
RSRP1-207ENST00000498238 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.64
RSRP1-207ENST00000498238 CUX1P39880 1505 aa19.02■□□□□ 0.63
RSRP1-207ENST00000498238 CFTRP13569 1480 aa19.01■□□□□ 0.63
RSRP1-207ENST00000498238 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
RSRP1-207ENST00000498238 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
RSRP1-207ENST00000498238 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
RSRP1-207ENST00000498238 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
RSRP1-207ENST00000498238 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
RSRP1-207ENST00000498238 APLP2Q06481 763 aa18.96■□□□□ 0.63
RSRP1-207ENST00000498238 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
RSRP1-207ENST00000498238 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
RSRP1-207ENST00000498238 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
RSRP1-207ENST00000498238 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
RSRP1-207ENST00000498238 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
RSRP1-207ENST00000498238 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
RSRP1-207ENST00000498238 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.59
RSRP1-207ENST00000498238 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
RSRP1-207ENST00000498238 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
RSRP1-207ENST00000498238 CUX2O14529 1486 aa18.74■□□□□ 0.59
RSRP1-207ENST00000498238 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
RSRP1-207ENST00000498238 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
RSRP1-207ENST00000498238 ARHGAP35Q9NRY4 1499 aa18.69■□□□□ 0.58
RSRP1-207ENST00000498238 IGF1RP08069 1367 aa18.67■□□□□ 0.58
RSRP1-207ENST00000498238 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
RSRP1-207ENST00000498238 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
RSRP1-207ENST00000498238 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
RSRP1-207ENST00000498238 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
RSRP1-207ENST00000498238 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
RSRP1-207ENST00000498238 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
RSRP1-207ENST00000498238 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
RSRP1-207ENST00000498238 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
RSRP1-207ENST00000498238 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
RSRP1-207ENST00000498238 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
RSRP1-207ENST00000498238 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
RSRP1-207ENST00000498238 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
RSRP1-207ENST00000498238 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms