RNA–Protein interactions for RNA: ENST00000497935.5

NELFCD-212, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-212ENST00000497935 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
NELFCD-212ENST00000497935 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
NELFCD-212ENST00000497935 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
NELFCD-212ENST00000497935 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
NELFCD-212ENST00000497935 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
NELFCD-212ENST00000497935 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
NELFCD-212ENST00000497935 KCNA4P22459 653 aa14.91□□□□□ -0.02
NELFCD-212ENST00000497935 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
NELFCD-212ENST00000497935 SENP3Q9H4L4 574 aaPredicted RBP14.59□□□□□ -0.07
NELFCD-212ENST00000497935 NISCHQ9Y2I1 1504 aa14.47□□□□□ -0.09
NELFCD-212ENST00000497935 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
NELFCD-212ENST00000497935 ADRA2BP18089 450 aa14.41□□□□□ -0.1
NELFCD-212ENST00000497935 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
NELFCD-212ENST00000497935 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
NELFCD-212ENST00000497935 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
NELFCD-212ENST00000497935 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
NELFCD-212ENST00000497935 ZBTB22O15209 634 aa13.76□□□□□ -0.21
NELFCD-212ENST00000497935 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
NELFCD-212ENST00000497935 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
NELFCD-212ENST00000497935 FOXD1Q16676 465 aa13.39□□□□□ -0.27
NELFCD-212ENST00000497935 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
NELFCD-212ENST00000497935 FKBP8Q14318 412 aa13.22□□□□□ -0.29
NELFCD-212ENST00000497935 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
NELFCD-212ENST00000497935 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
NELFCD-212ENST00000497935 BCANQ96GW7 911 aa13.14□□□□□ -0.31
NELFCD-212ENST00000497935 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
NELFCD-212ENST00000497935 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
NELFCD-212ENST00000497935 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
NELFCD-212ENST00000497935 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
NELFCD-212ENST00000497935 ABCC9O60706 1549 aa12.96□□□□□ -0.33
NELFCD-212ENST00000497935 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
NELFCD-212ENST00000497935 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
NELFCD-212ENST00000497935 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
NELFCD-212ENST00000497935 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
NELFCD-212ENST00000497935 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
NELFCD-212ENST00000497935 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
NELFCD-212ENST00000497935 ARXQ96QS3 562 aa12.78□□□□□ -0.36
NELFCD-212ENST00000497935 SCAF1Q9H7N4 1312 aaKnown RBP12.76□□□□□ -0.37
NELFCD-212ENST00000497935 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
NELFCD-212ENST00000497935 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
NELFCD-212ENST00000497935 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
NELFCD-212ENST00000497935 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
NELFCD-212ENST00000497935 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
NELFCD-212ENST00000497935 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
NELFCD-212ENST00000497935 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
NELFCD-212ENST00000497935 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
NELFCD-212ENST00000497935 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
NELFCD-212ENST00000497935 HOMEZQ8IX15 550 aa12.42□□□□□ -0.42
NELFCD-212ENST00000497935 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
NELFCD-212ENST00000497935 FBLN2P98095 1184 aa12.38□□□□□ -0.43
NELFCD-212ENST00000497935 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
NELFCD-212ENST00000497935 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
NELFCD-212ENST00000497935 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
NELFCD-212ENST00000497935 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
NELFCD-212ENST00000497935 PKD2Q13563 968 aa12.24□□□□□ -0.45
NELFCD-212ENST00000497935 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
NELFCD-212ENST00000497935 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
NELFCD-212ENST00000497935 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
NELFCD-212ENST00000497935 NACADO15069 1562 aa12.2□□□□□ -0.46
NELFCD-212ENST00000497935 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
NELFCD-212ENST00000497935 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
NELFCD-212ENST00000497935 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
NELFCD-212ENST00000497935 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
NELFCD-212ENST00000497935 NBR1Q14596 966 aa12.13□□□□□ -0.47
NELFCD-212ENST00000497935 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
NELFCD-212ENST00000497935 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
NELFCD-212ENST00000497935 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
NELFCD-212ENST00000497935 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
NELFCD-212ENST00000497935 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
NELFCD-212ENST00000497935 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
NELFCD-212ENST00000497935 PROM2Q8N271 834 aa12□□□□□ -0.49
NELFCD-212ENST00000497935 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
NELFCD-212ENST00000497935 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
NELFCD-212ENST00000497935 ZCCHC6Q5VYS8 1495 aaKnown RBP11.98□□□□□ -0.49
NELFCD-212ENST00000497935 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
NELFCD-212ENST00000497935 UNC13AQ9UPW8 1703 aa11.97□□□□□ -0.49
NELFCD-212ENST00000497935 PODXL2Q9NZ53 605 aa11.93□□□□□ -0.5
NELFCD-212ENST00000497935 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
NELFCD-212ENST00000497935 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
NELFCD-212ENST00000497935 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
NELFCD-212ENST00000497935 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
NELFCD-212ENST00000497935 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
NELFCD-212ENST00000497935 MSH5O43196 834 aa11.83□□□□□ -0.52
NELFCD-212ENST00000497935 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
NELFCD-212ENST00000497935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
NELFCD-212ENST00000497935 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
NELFCD-212ENST00000497935 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
NELFCD-212ENST00000497935 RGL2O15211 777 aa11.77□□□□□ -0.53
NELFCD-212ENST00000497935 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
NELFCD-212ENST00000497935 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
NELFCD-212ENST00000497935 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
NELFCD-212ENST00000497935 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
NELFCD-212ENST00000497935 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
NELFCD-212ENST00000497935 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
NELFCD-212ENST00000497935 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
NELFCD-212ENST00000497935 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
NELFCD-212ENST00000497935 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
NELFCD-212ENST00000497935 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
NELFCD-212ENST00000497935 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
NELFCD-212ENST00000497935 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms