RNA–Protein interactions for RNA: ENST00000497865.5

RND3-209, Transcript of Rho family GTPase 3, humanhuman

TSL 2

Gene RND3, Length 880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-209ENST00000497865 AEBP2Q6ZN18 517 aaPredicted RBP31.58■■■□□ 2.65
RND3-209ENST00000497865 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
RND3-209ENST00000497865 SENP3Q9H4L4 574 aaPredicted RBP27.1■■□□□ 1.93
RND3-209ENST00000497865 PHF23Q9BUL5 403 aaPredicted RBP26.69■■□□□ 1.86
RND3-209ENST00000497865 FOXD1Q16676 465 aa25.22■■□□□ 1.63
RND3-209ENST00000497865 MSH5O43196 834 aa23.8■■□□□ 1.4
RND3-209ENST00000497865 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
RND3-209ENST00000497865 POTEDQ86YR6 584 aa23.59■■□□□ 1.37
RND3-209ENST00000497865 PIAS4Q8N2W9 510 aaPredicted RBP23.54■■□□□ 1.36
RND3-209ENST00000497865 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
RND3-209ENST00000497865 ADRA2BP18089 450 aa23.28■■□□□ 1.32
RND3-209ENST00000497865 SCAF1Q9H7N4 1312 aaKnown RBP21.47■■□□□ 1.03
RND3-209ENST00000497865 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
RND3-209ENST00000497865 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
RND3-209ENST00000497865 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
RND3-209ENST00000497865 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
RND3-209ENST00000497865 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
RND3-209ENST00000497865 HOXD11P31277 338 aaPredicted RBP20.54■□□□□ 0.88
RND3-209ENST00000497865 CNKSR2Q8WXI2 1034 aa20.47■□□□□ 0.87
RND3-209ENST00000497865 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
RND3-209ENST00000497865 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
RND3-209ENST00000497865 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
RND3-209ENST00000497865 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
RND3-209ENST00000497865 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
RND3-209ENST00000497865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
RND3-209ENST00000497865 NPM3O75607 178 aaKnown RBP19.56■□□□□ 0.72
RND3-209ENST00000497865 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
RND3-209ENST00000497865 CAPN15O75808 1086 aa18.94■□□□□ 0.62
RND3-209ENST00000497865 KCNA4P22459 653 aa18.92■□□□□ 0.62
RND3-209ENST00000497865 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
RND3-209ENST00000497865 DSG3P32926 999 aa18.85■□□□□ 0.61
RND3-209ENST00000497865 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
RND3-209ENST00000497865 APLP2Q06481 763 aa18.7■□□□□ 0.58
RND3-209ENST00000497865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
RND3-209ENST00000497865 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
RND3-209ENST00000497865 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
RND3-209ENST00000497865 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
RND3-209ENST00000497865 POTEHQ6S545 545 aa18.46■□□□□ 0.55
RND3-209ENST00000497865 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
RND3-209ENST00000497865 ABCB7O75027 752 aa18.41■□□□□ 0.54
RND3-209ENST00000497865 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
RND3-209ENST00000497865 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
RND3-209ENST00000497865 POLA2Q14181 598 aa18■□□□□ 0.47
RND3-209ENST00000497865 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
RND3-209ENST00000497865 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
RND3-209ENST00000497865 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
RND3-209ENST00000497865 ZBTB12Q9Y330 459 aaPredicted RBP17.69■□□□□ 0.42
RND3-209ENST00000497865 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
RND3-209ENST00000497865 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
RND3-209ENST00000497865 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
RND3-209ENST00000497865 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
RND3-209ENST00000497865 ZBTB22O15209 634 aa17.34■□□□□ 0.37
RND3-209ENST00000497865 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
RND3-209ENST00000497865 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
RND3-209ENST00000497865 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
RND3-209ENST00000497865 PITPNM1O00562 1244 aa17.16■□□□□ 0.34
RND3-209ENST00000497865 FBLN2P98095 1184 aa17.14■□□□□ 0.33
RND3-209ENST00000497865 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
RND3-209ENST00000497865 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
RND3-209ENST00000497865 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
RND3-209ENST00000497865 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
RND3-209ENST00000497865 HAX1O00165 279 aa17.04■□□□□ 0.32
RND3-209ENST00000497865 SPDYE1Q8NFV5 336 aaPredicted RBP16.86■□□□□ 0.29
RND3-209ENST00000497865 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
RND3-209ENST00000497865 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
RND3-209ENST00000497865 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
RND3-209ENST00000497865 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
RND3-209ENST00000497865 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
RND3-209ENST00000497865 EVX2Q03828 476 aa16.69■□□□□ 0.26
RND3-209ENST00000497865 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
RND3-209ENST00000497865 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
RND3-209ENST00000497865 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
RND3-209ENST00000497865 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
RND3-209ENST00000497865 GABBR2O75899 941 aa16.38■□□□□ 0.21
RND3-209ENST00000497865 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
RND3-209ENST00000497865 FARP1Q9Y4F1 1045 aaPredicted RBP16.24■□□□□ 0.19
RND3-209ENST00000497865 CD44P16070 742 aaKnown RBP16.21■□□□□ 0.19
RND3-209ENST00000497865 CLCN6P51797 869 aa16.17■□□□□ 0.18
RND3-209ENST00000497865 LHX8Q68G74 356 aa16.14■□□□□ 0.17
RND3-209ENST00000497865 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
RND3-209ENST00000497865 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
RND3-209ENST00000497865 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
RND3-209ENST00000497865 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
RND3-209ENST00000497865 POTEIP0CG38 1075 aa15.97■□□□□ 0.15
RND3-209ENST00000497865 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
RND3-209ENST00000497865 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
RND3-209ENST00000497865 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
RND3-209ENST00000497865 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
RND3-209ENST00000497865 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
RND3-209ENST00000497865 GALR2O43603 387 aaPredicted RBP15.72■□□□□ 0.11
RND3-209ENST00000497865 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
RND3-209ENST00000497865 PHF12Q96QT6 1004 aa15.64■□□□□ 0.09
RND3-209ENST00000497865 PROM2Q8N271 834 aa15.51■□□□□ 0.07
RND3-209ENST00000497865 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
RND3-209ENST00000497865 POTEB2H3BUK9 544 aa15.43■□□□□ 0.06
RND3-209ENST00000497865 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
RND3-209ENST00000497865 MS4A3Q96HJ5 214 aa15.43■□□□□ 0.06
RND3-209ENST00000497865 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
RND3-209ENST00000497865 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
RND3-209ENST00000497865 ASTLQ6HA08 431 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms