RNA–Protein interactions for RNA: ENST00000497559.1

TNRC6B-209, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 5

Gene TNRC6B, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-209ENST00000497559 AEBP2Q6ZN18 517 aaPredicted RBP36.55■■■■□ 3.44
TNRC6B-209ENST00000497559 CHIC1Q5VXU3 224 aa34.77■■■■□ 3.16
TNRC6B-209ENST00000497559 SENP3Q9H4L4 574 aaPredicted RBP31.16■■■□□ 2.58
TNRC6B-209ENST00000497559 PHF23Q9BUL5 403 aaPredicted RBP30.78■■■□□ 2.52
TNRC6B-209ENST00000497559 FOXD1Q16676 465 aa29.04■■■□□ 2.24
TNRC6B-209ENST00000497559 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
TNRC6B-209ENST00000497559 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
TNRC6B-209ENST00000497559 PIAS4Q8N2W9 510 aaPredicted RBP27.15■■□□□ 1.94
TNRC6B-209ENST00000497559 MSH5O43196 834 aa27.14■■□□□ 1.94
TNRC6B-209ENST00000497559 ADRA2BP18089 450 aa27.14■■□□□ 1.94
TNRC6B-209ENST00000497559 POTEDQ86YR6 584 aa26.36■■□□□ 1.81
TNRC6B-209ENST00000497559 MAPK8IP2Q13387 824 aaPredicted RBP24.91■■□□□ 1.58
TNRC6B-209ENST00000497559 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
TNRC6B-209ENST00000497559 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
TNRC6B-209ENST00000497559 PPP4R3CPQ6ZMV5 832 aa24.4■■□□□ 1.5
TNRC6B-209ENST00000497559 CNKSR2Q8WXI2 1034 aa23.93■■□□□ 1.42
TNRC6B-209ENST00000497559 HOXD11P31277 338 aaPredicted RBP23.85■■□□□ 1.41
TNRC6B-209ENST00000497559 DCAF8L1A6NGE4 600 aa23.71■■□□□ 1.39
TNRC6B-209ENST00000497559 RNF216Q9NWF9 866 aaPredicted RBP23.69■■□□□ 1.38
TNRC6B-209ENST00000497559 NCBP3Q53F19 620 aaKnown RBP23.5■■□□□ 1.35
TNRC6B-209ENST00000497559 CACNB1Q02641 598 aaPredicted RBP23.26■■□□□ 1.31
TNRC6B-209ENST00000497559 RNF39Q9H2S5 420 aa23.17■■□□□ 1.3
TNRC6B-209ENST00000497559 NPM3O75607 178 aaKnown RBP23.15■■□□□ 1.3
TNRC6B-209ENST00000497559 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
TNRC6B-209ENST00000497559 C1QBPQ07021 282 aaKnown RBP22.84■■□□□ 1.25
TNRC6B-209ENST00000497559 KCNA4P22459 653 aa22.78■■□□□ 1.24
TNRC6B-209ENST00000497559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
TNRC6B-209ENST00000497559 U3KPZ7 1027 aaPredicted RBP22.25■■□□□ 1.15
TNRC6B-209ENST00000497559 SLC4A2P04920 1241 aa22.09■■□□□ 1.13
TNRC6B-209ENST00000497559 SPINK5Q9NQ38 1064 aaPredicted RBP21.92■■□□□ 1.1
TNRC6B-209ENST00000497559 CAPN15O75808 1086 aa21.87■■□□□ 1.09
TNRC6B-209ENST00000497559 DSG3P32926 999 aa21.72■■□□□ 1.07
TNRC6B-209ENST00000497559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
TNRC6B-209ENST00000497559 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
TNRC6B-209ENST00000497559 APLP2Q06481 763 aa21.64■■□□□ 1.05
TNRC6B-209ENST00000497559 TRHP20396 242 aaPredicted RBP21.55■■□□□ 1.04
TNRC6B-209ENST00000497559 SAMD1Q6SPF0 538 aaPredicted RBP21.52■■□□□ 1.04
TNRC6B-209ENST00000497559 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
TNRC6B-209ENST00000497559 ZNF219Q9P2Y4 722 aaPredicted RBP21.5■■□□□ 1.03
TNRC6B-209ENST00000497559 MYCNP04198 464 aaPredicted RBP21.41■■□□□ 1.02
TNRC6B-209ENST00000497559 ABCB7O75027 752 aa21.37■■□□□ 1.01
TNRC6B-209ENST00000497559 FOXD4L1Q9NU39 408 aa21.22■□□□□ 0.99
TNRC6B-209ENST00000497559 POLA2Q14181 598 aa20.99■□□□□ 0.95
TNRC6B-209ENST00000497559 ZBTB22O15209 634 aa20.94■□□□□ 0.94
TNRC6B-209ENST00000497559 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
TNRC6B-209ENST00000497559 RBM42Q9BTD8 480 aaKnown RBP20.72■□□□□ 0.91
TNRC6B-209ENST00000497559 POTEHQ6S545 545 aa20.67■□□□□ 0.9
TNRC6B-209ENST00000497559 ATXN8OSP0DMR3 200 aa20.58■□□□□ 0.89
TNRC6B-209ENST00000497559 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
TNRC6B-209ENST00000497559 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
TNRC6B-209ENST00000497559 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
TNRC6B-209ENST00000497559 CHRDL2Q6WN34 429 aa20.24■□□□□ 0.83
TNRC6B-209ENST00000497559 FBLN2P98095 1184 aa20.09■□□□□ 0.81
TNRC6B-209ENST00000497559 REM2Q8IYK8 340 aaPredicted RBP20.09■□□□□ 0.81
TNRC6B-209ENST00000497559 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
TNRC6B-209ENST00000497559 MKRN4PQ13434 485 aaPredicted RBP19.96■□□□□ 0.79
TNRC6B-209ENST00000497559 SPDYE2BA6NHP3 402 aa19.93■□□□□ 0.78
TNRC6B-209ENST00000497559 SPDYE6P0CI01 402 aa19.93■□□□□ 0.78
TNRC6B-209ENST00000497559 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
TNRC6B-209ENST00000497559 PITPNM1O00562 1244 aa19.86■□□□□ 0.77
TNRC6B-209ENST00000497559 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
TNRC6B-209ENST00000497559 PIP4P2Q8N4L2 257 aa19.78■□□□□ 0.76
TNRC6B-209ENST00000497559 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
TNRC6B-209ENST00000497559 FXR2P51116 673 aaKnown RBP eCLIP19.68■□□□□ 0.74
TNRC6B-209ENST00000497559 SSUH2Q9Y2M2 353 aa19.67■□□□□ 0.74
TNRC6B-209ENST00000497559 SPDYE1Q8NFV5 336 aaPredicted RBP19.57■□□□□ 0.72
TNRC6B-209ENST00000497559 CLEC11AQ9Y240 323 aa19.54■□□□□ 0.72
TNRC6B-209ENST00000497559 HAX1O00165 279 aa19.42■□□□□ 0.7
TNRC6B-209ENST00000497559 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
TNRC6B-209ENST00000497559 SP7Q8TDD2 431 aaPredicted RBP19.42■□□□□ 0.7
TNRC6B-209ENST00000497559 PRKAR2AP13861 404 aaKnown RBP19.35■□□□□ 0.69
TNRC6B-209ENST00000497559 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
TNRC6B-209ENST00000497559 EVX2Q03828 476 aa19.18■□□□□ 0.66
TNRC6B-209ENST00000497559 CHADLQ6NUI6 762 aa19.15■□□□□ 0.66
TNRC6B-209ENST00000497559 SPDYE4A6NLX3 237 aa19.06■□□□□ 0.64
TNRC6B-209ENST00000497559 C19orf67A6NJJ6 358 aa19.04■□□□□ 0.64
TNRC6B-209ENST00000497559 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
TNRC6B-209ENST00000497559 FARP1Q9Y4F1 1045 aaPredicted RBP18.88■□□□□ 0.61
TNRC6B-209ENST00000497559 CREBZFQ9NS37 354 aa18.76■□□□□ 0.59
TNRC6B-209ENST00000497559 GABBR2O75899 941 aa18.75■□□□□ 0.59
TNRC6B-209ENST00000497559 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
TNRC6B-209ENST00000497559 PROM2Q8N271 834 aa18.6■□□□□ 0.57
TNRC6B-209ENST00000497559 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
TNRC6B-209ENST00000497559 CLCN6P51797 869 aa18.48■□□□□ 0.55
TNRC6B-209ENST00000497559 MNX1P50219 401 aaPredicted RBP18.45■□□□□ 0.54
TNRC6B-209ENST00000497559 ZNF579Q8NAF0 562 aaKnown RBP18.45■□□□□ 0.54
TNRC6B-209ENST00000497559 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
TNRC6B-209ENST00000497559 PAK3O75914 559 aaPredicted RBP18.35■□□□□ 0.53
TNRC6B-209ENST00000497559 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
TNRC6B-209ENST00000497559 DCBLD2Q96PD2 775 aa18.26■□□□□ 0.51
TNRC6B-209ENST00000497559 PHF12Q96QT6 1004 aa18.24■□□□□ 0.51
TNRC6B-209ENST00000497559 GALR2O43603 387 aaPredicted RBP18.22■□□□□ 0.51
TNRC6B-209ENST00000497559 LHX8Q68G74 356 aa18.22■□□□□ 0.51
TNRC6B-209ENST00000497559 MIER1Q8N108 512 aa18.19■□□□□ 0.5
TNRC6B-209ENST00000497559 FKBP8Q14318 412 aa18.18■□□□□ 0.5
TNRC6B-209ENST00000497559 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
TNRC6B-209ENST00000497559 TSPYL2Q9H2G4 693 aaPredicted RBP18.1■□□□□ 0.49
TNRC6B-209ENST00000497559 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
TNRC6B-209ENST00000497559 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
TNRC6B-209ENST00000497559 MS4A3Q96HJ5 214 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms