RNA–Protein interactions for RNA: ENST00000496778.1

RRAGC-204, Transcript of Ras related GTP binding C, humanhuman

TSL 5

Gene RRAGC, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRAGC-204ENST00000496778 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
RRAGC-204ENST00000496778 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
RRAGC-204ENST00000496778 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
RRAGC-204ENST00000496778 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
RRAGC-204ENST00000496778 FOXD1Q16676 465 aa23.32■■□□□ 1.32
RRAGC-204ENST00000496778 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
RRAGC-204ENST00000496778 MSH5O43196 834 aa21.88■■□□□ 1.09
RRAGC-204ENST00000496778 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
RRAGC-204ENST00000496778 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
RRAGC-204ENST00000496778 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
RRAGC-204ENST00000496778 ADRA2BP18089 450 aa21.7■■□□□ 1.06
RRAGC-204ENST00000496778 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
RRAGC-204ENST00000496778 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
RRAGC-204ENST00000496778 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
RRAGC-204ENST00000496778 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
RRAGC-204ENST00000496778 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
RRAGC-204ENST00000496778 HOXD11P31277 338 aaPredicted RBP19.1■□□□□ 0.65
RRAGC-204ENST00000496778 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
RRAGC-204ENST00000496778 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
RRAGC-204ENST00000496778 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
RRAGC-204ENST00000496778 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
RRAGC-204ENST00000496778 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
RRAGC-204ENST00000496778 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
RRAGC-204ENST00000496778 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
RRAGC-204ENST00000496778 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
RRAGC-204ENST00000496778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
RRAGC-204ENST00000496778 KCNA4P22459 653 aa18.06■□□□□ 0.48
RRAGC-204ENST00000496778 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
RRAGC-204ENST00000496778 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
RRAGC-204ENST00000496778 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
RRAGC-204ENST00000496778 CAPN15O75808 1086 aa17.55■□□□□ 0.4
RRAGC-204ENST00000496778 DSG3P32926 999 aa17.44■□□□□ 0.38
RRAGC-204ENST00000496778 APLP2Q06481 763 aa17.37■□□□□ 0.37
RRAGC-204ENST00000496778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
RRAGC-204ENST00000496778 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
RRAGC-204ENST00000496778 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
RRAGC-204ENST00000496778 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
RRAGC-204ENST00000496778 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
RRAGC-204ENST00000496778 ABCB7O75027 752 aa17.13■□□□□ 0.33
RRAGC-204ENST00000496778 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
RRAGC-204ENST00000496778 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
RRAGC-204ENST00000496778 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
RRAGC-204ENST00000496778 POTEHQ6S545 545 aa16.83■□□□□ 0.28
RRAGC-204ENST00000496778 POLA2Q14181 598 aa16.79■□□□□ 0.28
RRAGC-204ENST00000496778 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
RRAGC-204ENST00000496778 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
RRAGC-204ENST00000496778 ZBTB22O15209 634 aa16.59■□□□□ 0.25
RRAGC-204ENST00000496778 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
RRAGC-204ENST00000496778 ATXN8OSP0DMR3 200 aa16.37■□□□□ 0.21
RRAGC-204ENST00000496778 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
RRAGC-204ENST00000496778 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
RRAGC-204ENST00000496778 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
RRAGC-204ENST00000496778 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
RRAGC-204ENST00000496778 FBLN2P98095 1184 aa16.06■□□□□ 0.16
RRAGC-204ENST00000496778 SPDYE2BA6NHP3 402 aa15.95■□□□□ 0.14
RRAGC-204ENST00000496778 SPDYE6P0CI01 402 aa15.95■□□□□ 0.14
RRAGC-204ENST00000496778 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
RRAGC-204ENST00000496778 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
RRAGC-204ENST00000496778 PIP4P2Q8N4L2 257 aa15.9■□□□□ 0.14
RRAGC-204ENST00000496778 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
RRAGC-204ENST00000496778 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
RRAGC-204ENST00000496778 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
RRAGC-204ENST00000496778 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
RRAGC-204ENST00000496778 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
RRAGC-204ENST00000496778 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
RRAGC-204ENST00000496778 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
RRAGC-204ENST00000496778 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
RRAGC-204ENST00000496778 HAX1O00165 279 aa15.64■□□□□ 0.09
RRAGC-204ENST00000496778 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
RRAGC-204ENST00000496778 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
RRAGC-204ENST00000496778 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
RRAGC-204ENST00000496778 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
RRAGC-204ENST00000496778 EVX2Q03828 476 aa15.39■□□□□ 0.05
RRAGC-204ENST00000496778 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
RRAGC-204ENST00000496778 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
RRAGC-204ENST00000496778 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
RRAGC-204ENST00000496778 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
RRAGC-204ENST00000496778 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
RRAGC-204ENST00000496778 GABBR2O75899 941 aa15.07■□□□□ 0
RRAGC-204ENST00000496778 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
RRAGC-204ENST00000496778 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
RRAGC-204ENST00000496778 CLCN6P51797 869 aa14.87□□□□□ -0.03
RRAGC-204ENST00000496778 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
RRAGC-204ENST00000496778 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
RRAGC-204ENST00000496778 PROM2Q8N271 834 aa14.77□□□□□ -0.05
RRAGC-204ENST00000496778 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
RRAGC-204ENST00000496778 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
RRAGC-204ENST00000496778 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
RRAGC-204ENST00000496778 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
RRAGC-204ENST00000496778 LHX8Q68G74 356 aa14.71□□□□□ -0.05
RRAGC-204ENST00000496778 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
RRAGC-204ENST00000496778 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
RRAGC-204ENST00000496778 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
RRAGC-204ENST00000496778 PLEKHG5O94827 1062 aa14.49□□□□□ -0.09
RRAGC-204ENST00000496778 MIER1Q8N108 512 aa14.46□□□□□ -0.09
RRAGC-204ENST00000496778 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
RRAGC-204ENST00000496778 MS4A3Q96HJ5 214 aa14.41□□□□□ -0.1
RRAGC-204ENST00000496778 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
RRAGC-204ENST00000496778 FKBP8Q14318 412 aa14.36□□□□□ -0.11
RRAGC-204ENST00000496778 PLCD3Q8N3E9 789 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms