RNA–Protein interactions for RNA: ENST00000496100.1

U2SURP-216, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 4

Gene U2SURP, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-216ENST00000496100 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
U2SURP-216ENST00000496100 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
U2SURP-216ENST00000496100 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
U2SURP-216ENST00000496100 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
U2SURP-216ENST00000496100 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
U2SURP-216ENST00000496100 FOXD1Q16676 465 aa18.27■□□□□ 0.52
U2SURP-216ENST00000496100 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
U2SURP-216ENST00000496100 ADRA2BP18089 450 aa17.52■□□□□ 0.4
U2SURP-216ENST00000496100 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
U2SURP-216ENST00000496100 MSH5O43196 834 aa17.02■□□□□ 0.32
U2SURP-216ENST00000496100 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
U2SURP-216ENST00000496100 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
U2SURP-216ENST00000496100 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
U2SURP-216ENST00000496100 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
U2SURP-216ENST00000496100 KCNA4P22459 653 aa15.86■□□□□ 0.13
U2SURP-216ENST00000496100 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
U2SURP-216ENST00000496100 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
U2SURP-216ENST00000496100 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
U2SURP-216ENST00000496100 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
U2SURP-216ENST00000496100 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
U2SURP-216ENST00000496100 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
U2SURP-216ENST00000496100 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
U2SURP-216ENST00000496100 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
U2SURP-216ENST00000496100 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
U2SURP-216ENST00000496100 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
U2SURP-216ENST00000496100 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
U2SURP-216ENST00000496100 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
U2SURP-216ENST00000496100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.07
U2SURP-216ENST00000496100 ZBTB22O15209 634 aa14.6□□□□□ -0.07
U2SURP-216ENST00000496100 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
U2SURP-216ENST00000496100 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
U2SURP-216ENST00000496100 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
U2SURP-216ENST00000496100 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
U2SURP-216ENST00000496100 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
U2SURP-216ENST00000496100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
U2SURP-216ENST00000496100 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
U2SURP-216ENST00000496100 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
U2SURP-216ENST00000496100 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
U2SURP-216ENST00000496100 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
U2SURP-216ENST00000496100 APLP2Q06481 763 aa14.21□□□□□ -0.13
U2SURP-216ENST00000496100 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
U2SURP-216ENST00000496100 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
U2SURP-216ENST00000496100 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
U2SURP-216ENST00000496100 CAPN15O75808 1086 aa13.9□□□□□ -0.18
U2SURP-216ENST00000496100 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
U2SURP-216ENST00000496100 DSG3P32926 999 aa13.76□□□□□ -0.21
U2SURP-216ENST00000496100 POLA2Q14181 598 aa13.67□□□□□ -0.22
U2SURP-216ENST00000496100 ABCB7O75027 752 aa13.6□□□□□ -0.23
U2SURP-216ENST00000496100 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
U2SURP-216ENST00000496100 FBLN2P98095 1184 aa13.44□□□□□ -0.26
U2SURP-216ENST00000496100 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
U2SURP-216ENST00000496100 POTEHQ6S545 545 aa13.25□□□□□ -0.29
U2SURP-216ENST00000496100 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
U2SURP-216ENST00000496100 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
U2SURP-216ENST00000496100 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
U2SURP-216ENST00000496100 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
U2SURP-216ENST00000496100 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
U2SURP-216ENST00000496100 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
U2SURP-216ENST00000496100 FKBP8Q14318 412 aa13.09□□□□□ -0.31
U2SURP-216ENST00000496100 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
U2SURP-216ENST00000496100 PROM2Q8N271 834 aa13.04□□□□□ -0.32
U2SURP-216ENST00000496100 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
U2SURP-216ENST00000496100 AKT1S1Q96B36 256 aa13□□□□□ -0.33
U2SURP-216ENST00000496100 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
U2SURP-216ENST00000496100 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
U2SURP-216ENST00000496100 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
U2SURP-216ENST00000496100 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
U2SURP-216ENST00000496100 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
U2SURP-216ENST00000496100 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
U2SURP-216ENST00000496100 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
U2SURP-216ENST00000496100 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
U2SURP-216ENST00000496100 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
U2SURP-216ENST00000496100 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
U2SURP-216ENST00000496100 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
U2SURP-216ENST00000496100 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
U2SURP-216ENST00000496100 MIER1Q8N108 512 aa12.39□□□□□ -0.43
U2SURP-216ENST00000496100 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
U2SURP-216ENST00000496100 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
U2SURP-216ENST00000496100 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
U2SURP-216ENST00000496100 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
U2SURP-216ENST00000496100 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
U2SURP-216ENST00000496100 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
U2SURP-216ENST00000496100 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
U2SURP-216ENST00000496100 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
U2SURP-216ENST00000496100 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
U2SURP-216ENST00000496100 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
U2SURP-216ENST00000496100 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
U2SURP-216ENST00000496100 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
U2SURP-216ENST00000496100 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
U2SURP-216ENST00000496100 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
U2SURP-216ENST00000496100 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
U2SURP-216ENST00000496100 NUBP1P53384 320 aa12.15□□□□□ -0.46
U2SURP-216ENST00000496100 HAX1O00165 279 aa12.12□□□□□ -0.47
U2SURP-216ENST00000496100 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
U2SURP-216ENST00000496100 GSE1Q14687 1217 aa12.04□□□□□ -0.48
U2SURP-216ENST00000496100 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
U2SURP-216ENST00000496100 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
U2SURP-216ENST00000496100 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
U2SURP-216ENST00000496100 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
U2SURP-216ENST00000496100 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms