RNA–Protein interactions for RNA: ENST00000496091.1

TRIM27-206, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-206ENST00000496091 AEBP2Q6ZN18 517 aaPredicted RBP28.83■■■□□ 2.21
TRIM27-206ENST00000496091 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
TRIM27-206ENST00000496091 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
TRIM27-206ENST00000496091 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
TRIM27-206ENST00000496091 FOXD1Q16676 465 aa22.93■■□□□ 1.26
TRIM27-206ENST00000496091 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
TRIM27-206ENST00000496091 MSH5O43196 834 aa21.48■■□□□ 1.03
TRIM27-206ENST00000496091 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
TRIM27-206ENST00000496091 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
TRIM27-206ENST00000496091 ADRA2BP18089 450 aa21.37■■□□□ 1.01
TRIM27-206ENST00000496091 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
TRIM27-206ENST00000496091 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
TRIM27-206ENST00000496091 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
TRIM27-206ENST00000496091 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
TRIM27-206ENST00000496091 PPP4R3CPQ6ZMV5 832 aa19.21■□□□□ 0.67
TRIM27-206ENST00000496091 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
TRIM27-206ENST00000496091 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
TRIM27-206ENST00000496091 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
TRIM27-206ENST00000496091 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
TRIM27-206ENST00000496091 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
TRIM27-206ENST00000496091 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
TRIM27-206ENST00000496091 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
TRIM27-206ENST00000496091 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
TRIM27-206ENST00000496091 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
TRIM27-206ENST00000496091 C1QBPQ07021 282 aaKnown RBP18.09■□□□□ 0.49
TRIM27-206ENST00000496091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.463e-12■□□□□ 10.7
TRIM27-206ENST00000496091 KCNA4P22459 653 aa17.85■□□□□ 0.45
TRIM27-206ENST00000496091 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
TRIM27-206ENST00000496091 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
TRIM27-206ENST00000496091 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-206ENST00000496091 CAPN15O75808 1086 aa17.23■□□□□ 0.35
TRIM27-206ENST00000496091 DSG3P32926 999 aa17.16■□□□□ 0.34
TRIM27-206ENST00000496091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
TRIM27-206ENST00000496091 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
TRIM27-206ENST00000496091 APLP2Q06481 763 aa17.09■□□□□ 0.33
TRIM27-206ENST00000496091 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
TRIM27-206ENST00000496091 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
TRIM27-206ENST00000496091 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
TRIM27-206ENST00000496091 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
TRIM27-206ENST00000496091 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
TRIM27-206ENST00000496091 ABCB7O75027 752 aa16.8■□□□□ 0.28
TRIM27-206ENST00000496091 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
TRIM27-206ENST00000496091 POLA2Q14181 598 aa16.54■□□□□ 0.24
TRIM27-206ENST00000496091 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-206ENST00000496091 ZBTB22O15209 634 aa16.41■□□□□ 0.22
TRIM27-206ENST00000496091 POTEHQ6S545 545 aa16.39■□□□□ 0.21
TRIM27-206ENST00000496091 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
TRIM27-206ENST00000496091 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
TRIM27-206ENST00000496091 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
TRIM27-206ENST00000496091 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
TRIM27-206ENST00000496091 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
TRIM27-206ENST00000496091 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
TRIM27-206ENST00000496091 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
TRIM27-206ENST00000496091 FBLN2P98095 1184 aa15.81■□□□□ 0.12
TRIM27-206ENST00000496091 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
TRIM27-206ENST00000496091 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
TRIM27-206ENST00000496091 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
TRIM27-206ENST00000496091 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
TRIM27-206ENST00000496091 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
TRIM27-206ENST00000496091 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
TRIM27-206ENST00000496091 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
TRIM27-206ENST00000496091 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIM27-206ENST00000496091 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
TRIM27-206ENST00000496091 SSUH2Q9Y2M2 353 aa15.51■□□□□ 0.07
TRIM27-206ENST00000496091 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
TRIM27-206ENST00000496091 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
TRIM27-206ENST00000496091 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
TRIM27-206ENST00000496091 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
TRIM27-206ENST00000496091 HAX1O00165 279 aa15.34■□□□□ 0.05
TRIM27-206ENST00000496091 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM27-206ENST00000496091 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
TRIM27-206ENST00000496091 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
TRIM27-206ENST00000496091 EVX2Q03828 476 aa15.14■□□□□ 0.01
TRIM27-206ENST00000496091 CHADLQ6NUI6 762 aa15.06■□□□□ 0
TRIM27-206ENST00000496091 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
TRIM27-206ENST00000496091 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
TRIM27-206ENST00000496091 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
TRIM27-206ENST00000496091 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
TRIM27-206ENST00000496091 GABBR2O75899 941 aa14.82□□□□□ -0.04
TRIM27-206ENST00000496091 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
TRIM27-206ENST00000496091 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
TRIM27-206ENST00000496091 CLCN6P51797 869 aa14.67□□□□□ -0.06
TRIM27-206ENST00000496091 PROM2Q8N271 834 aa14.63□□□□□ -0.07
TRIM27-206ENST00000496091 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
TRIM27-206ENST00000496091 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
TRIM27-206ENST00000496091 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
TRIM27-206ENST00000496091 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRIM27-206ENST00000496091 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
TRIM27-206ENST00000496091 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
TRIM27-206ENST00000496091 LHX8Q68G74 356 aa14.43□□□□□ -0.1
TRIM27-206ENST00000496091 DCBLD2Q96PD2 775 aa14.42□□□□□ -0.1
TRIM27-206ENST00000496091 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
TRIM27-206ENST00000496091 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
TRIM27-206ENST00000496091 MIER1Q8N108 512 aa14.29□□□□□ -0.12
TRIM27-206ENST00000496091 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
TRIM27-206ENST00000496091 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
TRIM27-206ENST00000496091 FKBP8Q14318 412 aa14.2□□□□□ -0.14
TRIM27-206ENST00000496091 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
TRIM27-206ENST00000496091 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
TRIM27-206ENST00000496091 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms