RNA–Protein interactions for RNA: ENST00000495541.1

ACSL3-208, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-208ENST00000495541 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
ACSL3-208ENST00000495541 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
ACSL3-208ENST00000495541 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
ACSL3-208ENST00000495541 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
ACSL3-208ENST00000495541 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
ACSL3-208ENST00000495541 FOXD1Q16676 465 aa19.35■□□□□ 0.69
ACSL3-208ENST00000495541 MSH5O43196 834 aa18.32■□□□□ 0.52
ACSL3-208ENST00000495541 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
ACSL3-208ENST00000495541 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
ACSL3-208ENST00000495541 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
ACSL3-208ENST00000495541 ADRA2BP18089 450 aa17.24■□□□□ 0.35
ACSL3-208ENST00000495541 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
ACSL3-208ENST00000495541 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
ACSL3-208ENST00000495541 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
ACSL3-208ENST00000495541 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
ACSL3-208ENST00000495541 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
ACSL3-208ENST00000495541 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
ACSL3-208ENST00000495541 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
ACSL3-208ENST00000495541 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
ACSL3-208ENST00000495541 POTEHQ6S545 545 aa15.25■□□□□ 0.03
ACSL3-208ENST00000495541 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
ACSL3-208ENST00000495541 KCNA4P22459 653 aa15.15■□□□□ 0.02
ACSL3-208ENST00000495541 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
ACSL3-208ENST00000495541 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
ACSL3-208ENST00000495541 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
ACSL3-208ENST00000495541 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
ACSL3-208ENST00000495541 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
ACSL3-208ENST00000495541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.11
ACSL3-208ENST00000495541 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
ACSL3-208ENST00000495541 DSG3P32926 999 aa14.33□□□□□ -0.12
ACSL3-208ENST00000495541 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
ACSL3-208ENST00000495541 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
ACSL3-208ENST00000495541 CAPN15O75808 1086 aa14.13□□□□□ -0.15
ACSL3-208ENST00000495541 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
ACSL3-208ENST00000495541 ZBTB22O15209 634 aa14□□□□□ -0.17
ACSL3-208ENST00000495541 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
ACSL3-208ENST00000495541 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
ACSL3-208ENST00000495541 ABCB7O75027 752 aa13.8□□□□□ -0.2
ACSL3-208ENST00000495541 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
ACSL3-208ENST00000495541 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
ACSL3-208ENST00000495541 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
ACSL3-208ENST00000495541 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
ACSL3-208ENST00000495541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
ACSL3-208ENST00000495541 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
ACSL3-208ENST00000495541 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
ACSL3-208ENST00000495541 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
ACSL3-208ENST00000495541 APLP2Q06481 763 aa13.59□□□□□ -0.23
ACSL3-208ENST00000495541 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
ACSL3-208ENST00000495541 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
ACSL3-208ENST00000495541 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
ACSL3-208ENST00000495541 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
ACSL3-208ENST00000495541 HAX1O00165 279 aa13.25□□□□□ -0.29
ACSL3-208ENST00000495541 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
ACSL3-208ENST00000495541 POLA2Q14181 598 aa13.23□□□□□ -0.29
ACSL3-208ENST00000495541 EVX2Q03828 476 aa13.18□□□□□ -0.3
ACSL3-208ENST00000495541 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
ACSL3-208ENST00000495541 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
ACSL3-208ENST00000495541 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
ACSL3-208ENST00000495541 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
ACSL3-208ENST00000495541 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
ACSL3-208ENST00000495541 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
ACSL3-208ENST00000495541 LHX8Q68G74 356 aa12.94□□□□□ -0.34
ACSL3-208ENST00000495541 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
ACSL3-208ENST00000495541 FBLN2P98095 1184 aa12.86□□□□□ -0.35
ACSL3-208ENST00000495541 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
ACSL3-208ENST00000495541 GABBR2O75899 941 aa12.7□□□□□ -0.38
ACSL3-208ENST00000495541 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
ACSL3-208ENST00000495541 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
ACSL3-208ENST00000495541 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
ACSL3-208ENST00000495541 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
ACSL3-208ENST00000495541 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
ACSL3-208ENST00000495541 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
ACSL3-208ENST00000495541 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
ACSL3-208ENST00000495541 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
ACSL3-208ENST00000495541 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
ACSL3-208ENST00000495541 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
ACSL3-208ENST00000495541 PROM2Q8N271 834 aa12.39□□□□□ -0.43
ACSL3-208ENST00000495541 FKBP8Q14318 412 aa12.37□□□□□ -0.43
ACSL3-208ENST00000495541 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
ACSL3-208ENST00000495541 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
ACSL3-208ENST00000495541 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
ACSL3-208ENST00000495541 POTEMA6NI47 508 aa12.25□□□□□ -0.45
ACSL3-208ENST00000495541 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
ACSL3-208ENST00000495541 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
ACSL3-208ENST00000495541 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
ACSL3-208ENST00000495541 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
ACSL3-208ENST00000495541 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
ACSL3-208ENST00000495541 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
ACSL3-208ENST00000495541 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
ACSL3-208ENST00000495541 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
ACSL3-208ENST00000495541 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
ACSL3-208ENST00000495541 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
ACSL3-208ENST00000495541 CLCN6P51797 869 aa11.9□□□□□ -0.5
ACSL3-208ENST00000495541 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
ACSL3-208ENST00000495541 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
ACSL3-208ENST00000495541 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
ACSL3-208ENST00000495541 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
ACSL3-208ENST00000495541 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
ACSL3-208ENST00000495541 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
ACSL3-208ENST00000495541 MIER1Q8N108 512 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms