RNA–Protein interactions for RNA: ENST00000495235.2

PDCD6IP-216, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 2

Gene PDCD6IP, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-216ENST00000495235 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
PDCD6IP-216ENST00000495235 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
PDCD6IP-216ENST00000495235 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
PDCD6IP-216ENST00000495235 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
PDCD6IP-216ENST00000495235 FOXD1Q16676 465 aa23.83■■□□□ 1.41
PDCD6IP-216ENST00000495235 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
PDCD6IP-216ENST00000495235 MSH5O43196 834 aa22.43■■□□□ 1.18
PDCD6IP-216ENST00000495235 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
PDCD6IP-216ENST00000495235 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
PDCD6IP-216ENST00000495235 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
PDCD6IP-216ENST00000495235 ADRA2BP18089 450 aa21.9■■□□□ 1.1
PDCD6IP-216ENST00000495235 MAPK8IP2Q13387 824 aaPredicted RBP20.23■□□□□ 0.83
PDCD6IP-216ENST00000495235 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
PDCD6IP-216ENST00000495235 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
PDCD6IP-216ENST00000495235 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
PDCD6IP-216ENST00000495235 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
PDCD6IP-216ENST00000495235 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
PDCD6IP-216ENST00000495235 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
PDCD6IP-216ENST00000495235 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
PDCD6IP-216ENST00000495235 KCNA4P22459 653 aa19.24■□□□□ 0.67
PDCD6IP-216ENST00000495235 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
PDCD6IP-216ENST00000495235 RNF39Q9H2S5 420 aa19.12■□□□□ 0.65
PDCD6IP-216ENST00000495235 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
PDCD6IP-216ENST00000495235 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
PDCD6IP-216ENST00000495235 C1QBPQ07021 282 aaKnown RBP18.79■□□□□ 0.6
PDCD6IP-216ENST00000495235 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
PDCD6IP-216ENST00000495235 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
PDCD6IP-216ENST00000495235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.532e-6■□□□□ 8.1
PDCD6IP-216ENST00000495235 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
PDCD6IP-216ENST00000495235 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
PDCD6IP-216ENST00000495235 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
PDCD6IP-216ENST00000495235 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
PDCD6IP-216ENST00000495235 CAPN15O75808 1086 aa17.78■□□□□ 0.44
PDCD6IP-216ENST00000495235 DSG3P32926 999 aa17.78■□□□□ 0.44
PDCD6IP-216ENST00000495235 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
PDCD6IP-216ENST00000495235 ZBTB22O15209 634 aa17.66■□□□□ 0.42
PDCD6IP-216ENST00000495235 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
PDCD6IP-216ENST00000495235 POTEHQ6S545 545 aa17.61■□□□□ 0.41
PDCD6IP-216ENST00000495235 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
PDCD6IP-216ENST00000495235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
PDCD6IP-216ENST00000495235 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
PDCD6IP-216ENST00000495235 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
PDCD6IP-216ENST00000495235 APLP2Q06481 763 aa17.36■□□□□ 0.37
PDCD6IP-216ENST00000495235 ABCB7O75027 752 aa17.35■□□□□ 0.37
PDCD6IP-216ENST00000495235 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
PDCD6IP-216ENST00000495235 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
PDCD6IP-216ENST00000495235 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
PDCD6IP-216ENST00000495235 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
PDCD6IP-216ENST00000495235 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
PDCD6IP-216ENST00000495235 POLA2Q14181 598 aa16.84■□□□□ 0.29
PDCD6IP-216ENST00000495235 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
PDCD6IP-216ENST00000495235 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
PDCD6IP-216ENST00000495235 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
PDCD6IP-216ENST00000495235 FBLN2P98095 1184 aa16.37■□□□□ 0.21
PDCD6IP-216ENST00000495235 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
PDCD6IP-216ENST00000495235 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
PDCD6IP-216ENST00000495235 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.2
PDCD6IP-216ENST00000495235 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
PDCD6IP-216ENST00000495235 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
PDCD6IP-216ENST00000495235 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
PDCD6IP-216ENST00000495235 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDCD6IP-216ENST00000495235 HAX1O00165 279 aa16.06■□□□□ 0.16
PDCD6IP-216ENST00000495235 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
PDCD6IP-216ENST00000495235 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
PDCD6IP-216ENST00000495235 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
PDCD6IP-216ENST00000495235 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
PDCD6IP-216ENST00000495235 FKBP8Q14318 412 aa15.94■□□□□ 0.14
PDCD6IP-216ENST00000495235 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
PDCD6IP-216ENST00000495235 EVX2Q03828 476 aa15.86■□□□□ 0.13
PDCD6IP-216ENST00000495235 SSUH2Q9Y2M2 353 aa15.81■□□□□ 0.12
PDCD6IP-216ENST00000495235 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
PDCD6IP-216ENST00000495235 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
PDCD6IP-216ENST00000495235 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
PDCD6IP-216ENST00000495235 PROM2Q8N271 834 aa15.69■□□□□ 0.1
PDCD6IP-216ENST00000495235 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
PDCD6IP-216ENST00000495235 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
PDCD6IP-216ENST00000495235 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
PDCD6IP-216ENST00000495235 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
PDCD6IP-216ENST00000495235 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
PDCD6IP-216ENST00000495235 GABBR2O75899 941 aa15.47■□□□□ 0.07
PDCD6IP-216ENST00000495235 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
PDCD6IP-216ENST00000495235 LHX8Q68G74 356 aa15.29■□□□□ 0.04
PDCD6IP-216ENST00000495235 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
PDCD6IP-216ENST00000495235 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
PDCD6IP-216ENST00000495235 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
PDCD6IP-216ENST00000495235 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
PDCD6IP-216ENST00000495235 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
PDCD6IP-216ENST00000495235 MIER1Q8N108 512 aa15.14■□□□□ 0.01
PDCD6IP-216ENST00000495235 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
PDCD6IP-216ENST00000495235 CLCN6P51797 869 aa15.05■□□□□ -0
PDCD6IP-216ENST00000495235 CREBZFQ9NS37 354 aa15.04■□□□□ -0
PDCD6IP-216ENST00000495235 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
PDCD6IP-216ENST00000495235 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
PDCD6IP-216ENST00000495235 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
PDCD6IP-216ENST00000495235 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
PDCD6IP-216ENST00000495235 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
PDCD6IP-216ENST00000495235 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
PDCD6IP-216ENST00000495235 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDCD6IP-216ENST00000495235 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
PDCD6IP-216ENST00000495235 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms