RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
AC055758.1-201ENST00000494509 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
AC055758.1-201ENST00000494509 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
AC055758.1-201ENST00000494509 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
AC055758.1-201ENST00000494509 FOXD1Q16676 465 aa22.41■■□□□ 1.18
AC055758.1-201ENST00000494509 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
AC055758.1-201ENST00000494509 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
AC055758.1-201ENST00000494509 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
AC055758.1-201ENST00000494509 ADRA2BP18089 450 aa20.86■□□□□ 0.93
AC055758.1-201ENST00000494509 MSH5O43196 834 aa20.84■□□□□ 0.93
AC055758.1-201ENST00000494509 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
AC055758.1-201ENST00000494509 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
AC055758.1-201ENST00000494509 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
AC055758.1-201ENST00000494509 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
AC055758.1-201ENST00000494509 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
AC055758.1-201ENST00000494509 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
AC055758.1-201ENST00000494509 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
AC055758.1-201ENST00000494509 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
AC055758.1-201ENST00000494509 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
AC055758.1-201ENST00000494509 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
AC055758.1-201ENST00000494509 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
AC055758.1-201ENST00000494509 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
AC055758.1-201ENST00000494509 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
AC055758.1-201ENST00000494509 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
AC055758.1-201ENST00000494509 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
AC055758.1-201ENST00000494509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
AC055758.1-201ENST00000494509 KCNA4P22459 653 aa17.32■□□□□ 0.36
AC055758.1-201ENST00000494509 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
AC055758.1-201ENST00000494509 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
AC055758.1-201ENST00000494509 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
AC055758.1-201ENST00000494509 CAPN15O75808 1086 aa16.76■□□□□ 0.27
AC055758.1-201ENST00000494509 DSG3P32926 999 aa16.73■□□□□ 0.27
AC055758.1-201ENST00000494509 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
AC055758.1-201ENST00000494509 ABCB7O75027 752 aa16.45■□□□□ 0.22
AC055758.1-201ENST00000494509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
AC055758.1-201ENST00000494509 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
AC055758.1-201ENST00000494509 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
AC055758.1-201ENST00000494509 APLP2Q06481 763 aa16.38■□□□□ 0.21
AC055758.1-201ENST00000494509 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
AC055758.1-201ENST00000494509 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
AC055758.1-201ENST00000494509 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
AC055758.1-201ENST00000494509 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
AC055758.1-201ENST00000494509 POTEHQ6S545 545 aa16.06■□□□□ 0.16
AC055758.1-201ENST00000494509 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
AC055758.1-201ENST00000494509 POLA2Q14181 598 aa16.05■□□□□ 0.16
AC055758.1-201ENST00000494509 ZBTB22O15209 634 aa15.98■□□□□ 0.15
AC055758.1-201ENST00000494509 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
AC055758.1-201ENST00000494509 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
AC055758.1-201ENST00000494509 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
AC055758.1-201ENST00000494509 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
AC055758.1-201ENST00000494509 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
AC055758.1-201ENST00000494509 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
AC055758.1-201ENST00000494509 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
AC055758.1-201ENST00000494509 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
AC055758.1-201ENST00000494509 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
AC055758.1-201ENST00000494509 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
AC055758.1-201ENST00000494509 FBLN2P98095 1184 aa15.22■□□□□ 0.03
AC055758.1-201ENST00000494509 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
AC055758.1-201ENST00000494509 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
AC055758.1-201ENST00000494509 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
AC055758.1-201ENST00000494509 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
AC055758.1-201ENST00000494509 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC055758.1-201ENST00000494509 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
AC055758.1-201ENST00000494509 SSUH2Q9Y2M2 353 aa15.02■□□□□ -0
AC055758.1-201ENST00000494509 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
AC055758.1-201ENST00000494509 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
AC055758.1-201ENST00000494509 HAX1O00165 279 aa14.93□□□□□ -0.02
AC055758.1-201ENST00000494509 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
AC055758.1-201ENST00000494509 EVX2Q03828 476 aa14.9□□□□□ -0.02
AC055758.1-201ENST00000494509 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
AC055758.1-201ENST00000494509 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
AC055758.1-201ENST00000494509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
AC055758.1-201ENST00000494509 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
AC055758.1-201ENST00000494509 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
AC055758.1-201ENST00000494509 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
AC055758.1-201ENST00000494509 GABBR2O75899 941 aa14.46□□□□□ -0.09
AC055758.1-201ENST00000494509 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
AC055758.1-201ENST00000494509 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
AC055758.1-201ENST00000494509 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
AC055758.1-201ENST00000494509 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
AC055758.1-201ENST00000494509 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
AC055758.1-201ENST00000494509 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
AC055758.1-201ENST00000494509 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
AC055758.1-201ENST00000494509 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
AC055758.1-201ENST00000494509 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
AC055758.1-201ENST00000494509 PROM2Q8N271 834 aa14.12□□□□□ -0.15
AC055758.1-201ENST00000494509 LHX8Q68G74 356 aa14.09□□□□□ -0.15
AC055758.1-201ENST00000494509 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
AC055758.1-201ENST00000494509 CLCN6P51797 869 aa14.03□□□□□ -0.16
AC055758.1-201ENST00000494509 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
AC055758.1-201ENST00000494509 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
AC055758.1-201ENST00000494509 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
AC055758.1-201ENST00000494509 PAK3O75914 559 aaPredicted RBP13.92□□□□□ -0.18
AC055758.1-201ENST00000494509 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
AC055758.1-201ENST00000494509 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
AC055758.1-201ENST00000494509 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
AC055758.1-201ENST00000494509 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
AC055758.1-201ENST00000494509 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
AC055758.1-201ENST00000494509 MIER1Q8N108 512 aa13.74□□□□□ -0.21
AC055758.1-201ENST00000494509 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms