RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
SSB-212ENST00000494051 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
SSB-212ENST00000494051 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
SSB-212ENST00000494051 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
SSB-212ENST00000494051 POTEDQ86YR6 584 aa24.67■■□□□ 1.54
SSB-212ENST00000494051 FOXD1Q16676 465 aa23.96■■□□□ 1.43
SSB-212ENST00000494051 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
SSB-212ENST00000494051 MSH5O43196 834 aa22.94■■□□□ 1.26
SSB-212ENST00000494051 ADRA2BP18089 450 aa22.8■■□□□ 1.24
SSB-212ENST00000494051 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
SSB-212ENST00000494051 PIAS4Q8N2W9 510 aaPredicted RBP22.36■■□□□ 1.17
SSB-212ENST00000494051 PPP4R3CPQ6ZMV5 832 aa21.02■□□□□ 0.96
SSB-212ENST00000494051 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
SSB-212ENST00000494051 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
SSB-212ENST00000494051 KCNA4P22459 653 aa20.54■□□□□ 0.88
SSB-212ENST00000494051 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
SSB-212ENST00000494051 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
SSB-212ENST00000494051 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
SSB-212ENST00000494051 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
SSB-212ENST00000494051 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
SSB-212ENST00000494051 RNF216Q9NWF9 866 aaPredicted RBP20.01■□□□□ 0.79
SSB-212ENST00000494051 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
SSB-212ENST00000494051 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
SSB-212ENST00000494051 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
SSB-212ENST00000494051 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
SSB-212ENST00000494051 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
SSB-212ENST00000494051 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
SSB-212ENST00000494051 POTEHQ6S545 545 aa19.07■□□□□ 0.64
SSB-212ENST00000494051 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
SSB-212ENST00000494051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.642e-8■□□□□ 10.3
SSB-212ENST00000494051 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
SSB-212ENST00000494051 ZBTB22O15209 634 aa18.88■□□□□ 0.61
SSB-212ENST00000494051 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
SSB-212ENST00000494051 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
SSB-212ENST00000494051 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
SSB-212ENST00000494051 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
SSB-212ENST00000494051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
SSB-212ENST00000494051 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
SSB-212ENST00000494051 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
SSB-212ENST00000494051 APLP2Q06481 763 aa18.27■□□□□ 0.52
SSB-212ENST00000494051 ATXN8OSP0DMR3 200 aa18.2■□□□□ 0.5
SSB-212ENST00000494051 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
SSB-212ENST00000494051 CAPN15O75808 1086 aa18.16■□□□□ 0.5
SSB-212ENST00000494051 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
SSB-212ENST00000494051 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
SSB-212ENST00000494051 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
SSB-212ENST00000494051 ABCB7O75027 752 aa17.82■□□□□ 0.44
SSB-212ENST00000494051 DSG3P32926 999 aa17.8■□□□□ 0.44
SSB-212ENST00000494051 POLA2Q14181 598 aa17.77■□□□□ 0.44
SSB-212ENST00000494051 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
SSB-212ENST00000494051 FBLN2P98095 1184 aa17.4■□□□□ 0.38
SSB-212ENST00000494051 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
SSB-212ENST00000494051 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
SSB-212ENST00000494051 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
SSB-212ENST00000494051 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
SSB-212ENST00000494051 FKBP8Q14318 412 aa17.01■□□□□ 0.31
SSB-212ENST00000494051 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
SSB-212ENST00000494051 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
SSB-212ENST00000494051 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
SSB-212ENST00000494051 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
SSB-212ENST00000494051 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
SSB-212ENST00000494051 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
SSB-212ENST00000494051 SSUH2Q9Y2M2 353 aa16.81■□□□□ 0.28
SSB-212ENST00000494051 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
SSB-212ENST00000494051 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
SSB-212ENST00000494051 PROM2Q8N271 834 aa16.63■□□□□ 0.25
SSB-212ENST00000494051 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
SSB-212ENST00000494051 HAX1O00165 279 aa16.49■□□□□ 0.23
SSB-212ENST00000494051 SPDYE1Q8NFV5 336 aaPredicted RBP16.48■□□□□ 0.23
SSB-212ENST00000494051 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
SSB-212ENST00000494051 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
SSB-212ENST00000494051 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
SSB-212ENST00000494051 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
SSB-212ENST00000494051 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
SSB-212ENST00000494051 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
SSB-212ENST00000494051 PLSCR2Q9NRY7 297 aa16.23■□□□□ 0.19
SSB-212ENST00000494051 EVX2Q03828 476 aa16.21■□□□□ 0.19
SSB-212ENST00000494051 VASPP50552 380 aaPredicted RBP16.16■□□□□ 0.18
SSB-212ENST00000494051 LHX8Q68G74 356 aa16.15■□□□□ 0.18
SSB-212ENST00000494051 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
SSB-212ENST00000494051 MIER1Q8N108 512 aa16.14■□□□□ 0.17
SSB-212ENST00000494051 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
SSB-212ENST00000494051 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
SSB-212ENST00000494051 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
SSB-212ENST00000494051 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
SSB-212ENST00000494051 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
SSB-212ENST00000494051 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
SSB-212ENST00000494051 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
SSB-212ENST00000494051 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
SSB-212ENST00000494051 FARP1Q9Y4F1 1045 aaPredicted RBP15.87■□□□□ 0.13
SSB-212ENST00000494051 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
SSB-212ENST00000494051 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
SSB-212ENST00000494051 GABBR2O75899 941 aa15.76■□□□□ 0.11
SSB-212ENST00000494051 SPOCK2Q92563 424 aa15.76■□□□□ 0.11
SSB-212ENST00000494051 C19orf67A6NJJ6 358 aa15.67■□□□□ 0.1
SSB-212ENST00000494051 NUBP1P53384 320 aa15.67■□□□□ 0.1
SSB-212ENST00000494051 RASEFQ8IZ41 740 aa15.62■□□□□ 0.09
SSB-212ENST00000494051 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
SSB-212ENST00000494051 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
SSB-212ENST00000494051 DCAF8Q5TAQ9 597 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms