RNA–Protein interactions for RNA: ENST00000493878.1

GATAD1-203, Transcript of GATA zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene GATAD1, Length 2,017 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATAD1-203ENST00000493878 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.54
GATAD1-203ENST00000493878 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
GATAD1-203ENST00000493878 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
GATAD1-203ENST00000493878 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.88
GATAD1-203ENST00000493878 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
GATAD1-203ENST00000493878 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
GATAD1-203ENST00000493878 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
GATAD1-203ENST00000493878 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
GATAD1-203ENST00000493878 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
GATAD1-203ENST00000493878 ABCC9O60706 1549 aa19.67■□□□□ 0.74
GATAD1-203ENST00000493878 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
GATAD1-203ENST00000493878 NACADO15069 1562 aa19.44■□□□□ 0.7
GATAD1-203ENST00000493878 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
GATAD1-203ENST00000493878 HRCP23327 699 aa19.32■□□□□ 0.68
GATAD1-203ENST00000493878 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
GATAD1-203ENST00000493878 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
GATAD1-203ENST00000493878 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
GATAD1-203ENST00000493878 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
GATAD1-203ENST00000493878 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
GATAD1-203ENST00000493878 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
GATAD1-203ENST00000493878 TRIM41Q8WV44 630 aa19■□□□□ 0.63
GATAD1-203ENST00000493878 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
GATAD1-203ENST00000493878 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
GATAD1-203ENST00000493878 WIZO95785 1651 aa18.89■□□□□ 0.61
GATAD1-203ENST00000493878 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.61
GATAD1-203ENST00000493878 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
GATAD1-203ENST00000493878 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
GATAD1-203ENST00000493878 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
GATAD1-203ENST00000493878 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
GATAD1-203ENST00000493878 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
GATAD1-203ENST00000493878 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
GATAD1-203ENST00000493878 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
GATAD1-203ENST00000493878 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
GATAD1-203ENST00000493878 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
GATAD1-203ENST00000493878 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
GATAD1-203ENST00000493878 EEA1Q15075 1411 aa18.48■□□□□ 0.55
GATAD1-203ENST00000493878 MYT1Q01538 1121 aa18.46■□□□□ 0.55
GATAD1-203ENST00000493878 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
GATAD1-203ENST00000493878 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
GATAD1-203ENST00000493878 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
GATAD1-203ENST00000493878 SOGA1O94964 1423 aa18.3■□□□□ 0.52
GATAD1-203ENST00000493878 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
GATAD1-203ENST00000493878 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
GATAD1-203ENST00000493878 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
GATAD1-203ENST00000493878 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
GATAD1-203ENST00000493878 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
GATAD1-203ENST00000493878 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
GATAD1-203ENST00000493878 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
GATAD1-203ENST00000493878 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
GATAD1-203ENST00000493878 KIF21BO75037 1637 aa18.15■□□□□ 0.5
GATAD1-203ENST00000493878 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
GATAD1-203ENST00000493878 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
GATAD1-203ENST00000493878 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
GATAD1-203ENST00000493878 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
GATAD1-203ENST00000493878 TOP2BQ02880 1626 aa18■□□□□ 0.47
GATAD1-203ENST00000493878 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
GATAD1-203ENST00000493878 HMGXB3Q12766 1538 aa18■□□□□ 0.47
GATAD1-203ENST00000493878 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
GATAD1-203ENST00000493878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
GATAD1-203ENST00000493878 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
GATAD1-203ENST00000493878 CLIP1P30622 1438 aa17.94■□□□□ 0.46
GATAD1-203ENST00000493878 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
GATAD1-203ENST00000493878 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
GATAD1-203ENST00000493878 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
GATAD1-203ENST00000493878 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
GATAD1-203ENST00000493878 CFTRP13569 1480 aa17.81■□□□□ 0.44
GATAD1-203ENST00000493878 CUX1P39880 1505 aa17.76■□□□□ 0.43
GATAD1-203ENST00000493878 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
GATAD1-203ENST00000493878 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
GATAD1-203ENST00000493878 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.42
GATAD1-203ENST00000493878 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
GATAD1-203ENST00000493878 APLP2Q06481 763 aa17.69■□□□□ 0.42
GATAD1-203ENST00000493878 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
GATAD1-203ENST00000493878 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
GATAD1-203ENST00000493878 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
GATAD1-203ENST00000493878 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
GATAD1-203ENST00000493878 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
GATAD1-203ENST00000493878 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
GATAD1-203ENST00000493878 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
GATAD1-203ENST00000493878 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
GATAD1-203ENST00000493878 CUX2O14529 1486 aa17.54■□□□□ 0.4
GATAD1-203ENST00000493878 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
GATAD1-203ENST00000493878 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
GATAD1-203ENST00000493878 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
GATAD1-203ENST00000493878 IGF1RP08069 1367 aa17.53■□□□□ 0.4
GATAD1-203ENST00000493878 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
GATAD1-203ENST00000493878 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
GATAD1-203ENST00000493878 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
GATAD1-203ENST00000493878 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
GATAD1-203ENST00000493878 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
GATAD1-203ENST00000493878 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
GATAD1-203ENST00000493878 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
GATAD1-203ENST00000493878 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
GATAD1-203ENST00000493878 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
GATAD1-203ENST00000493878 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
GATAD1-203ENST00000493878 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.37
GATAD1-203ENST00000493878 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.36
GATAD1-203ENST00000493878 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
GATAD1-203ENST00000493878 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
GATAD1-203ENST00000493878 MIER1Q8N108 512 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms