RNA–Protein interactions for RNA: ENST00000493152.6

SUCLA2-208, Transcript of succinate-CoA ligase ADP-forming beta subunit, humanhuman

TSL 3

Gene SUCLA2, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLA2-208ENST00000493152 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
SUCLA2-208ENST00000493152 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
SUCLA2-208ENST00000493152 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
SUCLA2-208ENST00000493152 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
SUCLA2-208ENST00000493152 FOXD1Q16676 465 aa22.11■■□□□ 1.13
SUCLA2-208ENST00000493152 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
SUCLA2-208ENST00000493152 MSH5O43196 834 aa20.88■□□□□ 0.93
SUCLA2-208ENST00000493152 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
SUCLA2-208ENST00000493152 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
SUCLA2-208ENST00000493152 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
SUCLA2-208ENST00000493152 ADRA2BP18089 450 aa20.5■□□□□ 0.87
SUCLA2-208ENST00000493152 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
SUCLA2-208ENST00000493152 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
SUCLA2-208ENST00000493152 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
SUCLA2-208ENST00000493152 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
SUCLA2-208ENST00000493152 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
SUCLA2-208ENST00000493152 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
SUCLA2-208ENST00000493152 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
SUCLA2-208ENST00000493152 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
SUCLA2-208ENST00000493152 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
SUCLA2-208ENST00000493152 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
SUCLA2-208ENST00000493152 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
SUCLA2-208ENST00000493152 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
SUCLA2-208ENST00000493152 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
SUCLA2-208ENST00000493152 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
SUCLA2-208ENST00000493152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
SUCLA2-208ENST00000493152 KCNA4P22459 653 aa16.85■□□□□ 0.29
SUCLA2-208ENST00000493152 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
SUCLA2-208ENST00000493152 CAPN15O75808 1086 aa16.67■□□□□ 0.26
SUCLA2-208ENST00000493152 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
SUCLA2-208ENST00000493152 APLP2Q06481 763 aa16.55■□□□□ 0.24
SUCLA2-208ENST00000493152 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
SUCLA2-208ENST00000493152 DSG3P32926 999 aa16.54■□□□□ 0.24
SUCLA2-208ENST00000493152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
SUCLA2-208ENST00000493152 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
SUCLA2-208ENST00000493152 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
SUCLA2-208ENST00000493152 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
SUCLA2-208ENST00000493152 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
SUCLA2-208ENST00000493152 ABCB7O75027 752 aa16.2■□□□□ 0.18
SUCLA2-208ENST00000493152 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SUCLA2-208ENST00000493152 POTEHQ6S545 545 aa16.08■□□□□ 0.16
SUCLA2-208ENST00000493152 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
SUCLA2-208ENST00000493152 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
SUCLA2-208ENST00000493152 POLA2Q14181 598 aa15.89■□□□□ 0.13
SUCLA2-208ENST00000493152 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
SUCLA2-208ENST00000493152 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
SUCLA2-208ENST00000493152 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
SUCLA2-208ENST00000493152 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
SUCLA2-208ENST00000493152 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
SUCLA2-208ENST00000493152 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
SUCLA2-208ENST00000493152 ZBTB22O15209 634 aa15.43■□□□□ 0.06
SUCLA2-208ENST00000493152 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
SUCLA2-208ENST00000493152 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
SUCLA2-208ENST00000493152 FBLN2P98095 1184 aa15.21■□□□□ 0.03
SUCLA2-208ENST00000493152 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
SUCLA2-208ENST00000493152 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
SUCLA2-208ENST00000493152 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
SUCLA2-208ENST00000493152 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
SUCLA2-208ENST00000493152 PITPNM1O00562 1244 aa15.08■□□□□ 0
SUCLA2-208ENST00000493152 FXR2P51116 673 aaKnown RBP eCLIP15.01□□□□□ -0.01
SUCLA2-208ENST00000493152 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
SUCLA2-208ENST00000493152 HAX1O00165 279 aa14.95□□□□□ -0.02
SUCLA2-208ENST00000493152 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
SUCLA2-208ENST00000493152 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
SUCLA2-208ENST00000493152 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
SUCLA2-208ENST00000493152 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
SUCLA2-208ENST00000493152 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
SUCLA2-208ENST00000493152 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
SUCLA2-208ENST00000493152 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
SUCLA2-208ENST00000493152 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
SUCLA2-208ENST00000493152 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
SUCLA2-208ENST00000493152 EVX2Q03828 476 aa14.59□□□□□ -0.07
SUCLA2-208ENST00000493152 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
SUCLA2-208ENST00000493152 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
SUCLA2-208ENST00000493152 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
SUCLA2-208ENST00000493152 GABBR2O75899 941 aa14.35□□□□□ -0.11
SUCLA2-208ENST00000493152 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
SUCLA2-208ENST00000493152 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
SUCLA2-208ENST00000493152 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
SUCLA2-208ENST00000493152 CLCN6P51797 869 aa14.26□□□□□ -0.13
SUCLA2-208ENST00000493152 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
SUCLA2-208ENST00000493152 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
SUCLA2-208ENST00000493152 LHX8Q68G74 356 aa14.09□□□□□ -0.15
SUCLA2-208ENST00000493152 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
SUCLA2-208ENST00000493152 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
SUCLA2-208ENST00000493152 DCBLD2Q96PD2 775 aa14.03□□□□□ -0.16
SUCLA2-208ENST00000493152 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
SUCLA2-208ENST00000493152 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
SUCLA2-208ENST00000493152 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
SUCLA2-208ENST00000493152 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
SUCLA2-208ENST00000493152 GALR2O43603 387 aaPredicted RBP13.81□□□□□ -0.2
SUCLA2-208ENST00000493152 PROM2Q8N271 834 aa13.8□□□□□ -0.2
SUCLA2-208ENST00000493152 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
SUCLA2-208ENST00000493152 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
SUCLA2-208ENST00000493152 MIER1Q8N108 512 aa13.65□□□□□ -0.22
SUCLA2-208ENST00000493152 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
SUCLA2-208ENST00000493152 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
SUCLA2-208ENST00000493152 ASTLQ6HA08 431 aaPredicted RBP13.57□□□□□ -0.24
SUCLA2-208ENST00000493152 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
SUCLA2-208ENST00000493152 C7P10643 843 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms