RNA–Protein interactions for RNA: ENST00000493113.1

ALDH1A1-206, Transcript of aldehyde dehydrogenase 1 family member A1, humanhuman

TSL 2

Gene ALDH1A1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1-206ENST00000493113 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
ALDH1A1-206ENST00000493113 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
ALDH1A1-206ENST00000493113 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
ALDH1A1-206ENST00000493113 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
ALDH1A1-206ENST00000493113 FOXD1Q16676 465 aa19.26■□□□□ 0.67
ALDH1A1-206ENST00000493113 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
ALDH1A1-206ENST00000493113 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
ALDH1A1-206ENST00000493113 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
ALDH1A1-206ENST00000493113 MSH5O43196 834 aa18.18■□□□□ 0.5
ALDH1A1-206ENST00000493113 ADRA2BP18089 450 aa18.16■□□□□ 0.5
ALDH1A1-206ENST00000493113 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
ALDH1A1-206ENST00000493113 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
ALDH1A1-206ENST00000493113 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
ALDH1A1-206ENST00000493113 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
ALDH1A1-206ENST00000493113 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
ALDH1A1-206ENST00000493113 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
ALDH1A1-206ENST00000493113 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
ALDH1A1-206ENST00000493113 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
ALDH1A1-206ENST00000493113 KCNA4P22459 653 aa15.98■□□□□ 0.15
ALDH1A1-206ENST00000493113 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
ALDH1A1-206ENST00000493113 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
ALDH1A1-206ENST00000493113 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
ALDH1A1-206ENST00000493113 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
ALDH1A1-206ENST00000493113 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
ALDH1A1-206ENST00000493113 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
ALDH1A1-206ENST00000493113 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
ALDH1A1-206ENST00000493113 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
ALDH1A1-206ENST00000493113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
ALDH1A1-206ENST00000493113 SLC4A2P04920 1241 aa15.05■□□□□ -0
ALDH1A1-206ENST00000493113 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
ALDH1A1-206ENST00000493113 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
ALDH1A1-206ENST00000493113 POTEHQ6S545 545 aa14.74□□□□□ -0.05
ALDH1A1-206ENST00000493113 ZBTB22O15209 634 aa14.7□□□□□ -0.06
ALDH1A1-206ENST00000493113 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
ALDH1A1-206ENST00000493113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
ALDH1A1-206ENST00000493113 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
ALDH1A1-206ENST00000493113 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
ALDH1A1-206ENST00000493113 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
ALDH1A1-206ENST00000493113 APLP2Q06481 763 aa14.52□□□□□ -0.09
ALDH1A1-206ENST00000493113 CAPN15O75808 1086 aa14.49□□□□□ -0.09
ALDH1A1-206ENST00000493113 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
ALDH1A1-206ENST00000493113 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
ALDH1A1-206ENST00000493113 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
ALDH1A1-206ENST00000493113 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
ALDH1A1-206ENST00000493113 DSG3P32926 999 aa14.32□□□□□ -0.12
ALDH1A1-206ENST00000493113 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
ALDH1A1-206ENST00000493113 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
ALDH1A1-206ENST00000493113 ABCB7O75027 752 aa14.19□□□□□ -0.14
ALDH1A1-206ENST00000493113 POLA2Q14181 598 aa14.11□□□□□ -0.15
ALDH1A1-206ENST00000493113 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
ALDH1A1-206ENST00000493113 FBLN2P98095 1184 aa13.7□□□□□ -0.22
ALDH1A1-206ENST00000493113 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
ALDH1A1-206ENST00000493113 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
ALDH1A1-206ENST00000493113 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
ALDH1A1-206ENST00000493113 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
ALDH1A1-206ENST00000493113 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
ALDH1A1-206ENST00000493113 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
ALDH1A1-206ENST00000493113 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
ALDH1A1-206ENST00000493113 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
ALDH1A1-206ENST00000493113 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
ALDH1A1-206ENST00000493113 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
ALDH1A1-206ENST00000493113 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
ALDH1A1-206ENST00000493113 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
ALDH1A1-206ENST00000493113 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
ALDH1A1-206ENST00000493113 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
ALDH1A1-206ENST00000493113 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
ALDH1A1-206ENST00000493113 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
ALDH1A1-206ENST00000493113 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
ALDH1A1-206ENST00000493113 HAX1O00165 279 aa13.08□□□□□ -0.32
ALDH1A1-206ENST00000493113 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
ALDH1A1-206ENST00000493113 FKBP8Q14318 412 aa13.06□□□□□ -0.32
ALDH1A1-206ENST00000493113 PROM2Q8N271 834 aa13.02□□□□□ -0.33
ALDH1A1-206ENST00000493113 EVX2Q03828 476 aa12.99□□□□□ -0.33
ALDH1A1-206ENST00000493113 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
ALDH1A1-206ENST00000493113 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
ALDH1A1-206ENST00000493113 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
ALDH1A1-206ENST00000493113 NISCHQ9Y2I1 1504 aa12.86□□□□□ -0.35
ALDH1A1-206ENST00000493113 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
ALDH1A1-206ENST00000493113 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
ALDH1A1-206ENST00000493113 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
ALDH1A1-206ENST00000493113 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
ALDH1A1-206ENST00000493113 LHX8Q68G74 356 aa12.63□□□□□ -0.39
ALDH1A1-206ENST00000493113 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
ALDH1A1-206ENST00000493113 MIER1Q8N108 512 aa12.6□□□□□ -0.39
ALDH1A1-206ENST00000493113 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
ALDH1A1-206ENST00000493113 GABBR2O75899 941 aa12.57□□□□□ -0.4
ALDH1A1-206ENST00000493113 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
ALDH1A1-206ENST00000493113 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
ALDH1A1-206ENST00000493113 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
ALDH1A1-206ENST00000493113 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
ALDH1A1-206ENST00000493113 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
ALDH1A1-206ENST00000493113 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
ALDH1A1-206ENST00000493113 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
ALDH1A1-206ENST00000493113 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
ALDH1A1-206ENST00000493113 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
ALDH1A1-206ENST00000493113 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
ALDH1A1-206ENST00000493113 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
ALDH1A1-206ENST00000493113 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
ALDH1A1-206ENST00000493113 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
ALDH1A1-206ENST00000493113 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms