RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-205ENST00000493026 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
PSMD11-205ENST00000493026 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
PSMD11-205ENST00000493026 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
PSMD11-205ENST00000493026 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
PSMD11-205ENST00000493026 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
PSMD11-205ENST00000493026 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
PSMD11-205ENST00000493026 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
PSMD11-205ENST00000493026 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
PSMD11-205ENST00000493026 RTN4Q9NQC3 1192 aaKnown RBP22.31■■□□□ 1.16
PSMD11-205ENST00000493026 ZCCHC6Q5VYS8 1495 aaKnown RBP22.24■■□□□ 1.15
PSMD11-205ENST00000493026 KCNA4P22459 653 aa22.1■■□□□ 1.13
PSMD11-205ENST00000493026 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
PSMD11-205ENST00000493026 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
PSMD11-205ENST00000493026 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
PSMD11-205ENST00000493026 SUPT5HO00267 1087 aaKnown RBP21.73■■□□□ 1.07
PSMD11-205ENST00000493026 AMER1Q5JTC6 1135 aaPredicted RBP21.49■■□□□ 1.03
PSMD11-205ENST00000493026 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
PSMD11-205ENST00000493026 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
PSMD11-205ENST00000493026 PRKCSHP14314 528 aaPredicted RBP21.15■□□□□ 0.98
PSMD11-205ENST00000493026 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
PSMD11-205ENST00000493026 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
PSMD11-205ENST00000493026 ADRA2BP18089 450 aa21.03■□□□□ 0.96
PSMD11-205ENST00000493026 ABCC9O60706 1549 aa20.97■□□□□ 0.95
PSMD11-205ENST00000493026 DAXXQ9UER7 740 aaPredicted RBP20.87■□□□□ 0.93
PSMD11-205ENST00000493026 HRCP23327 699 aa20.8■□□□□ 0.92
PSMD11-205ENST00000493026 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
PSMD11-205ENST00000493026 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
PSMD11-205ENST00000493026 NACADO15069 1562 aa20.69■□□□□ 0.9
PSMD11-205ENST00000493026 RB1CC1Q8TDY2 1594 aa20.6■□□□□ 0.89
PSMD11-205ENST00000493026 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
PSMD11-205ENST00000493026 ZBTB22O15209 634 aa20.59■□□□□ 0.89
PSMD11-205ENST00000493026 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
PSMD11-205ENST00000493026 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
PSMD11-205ENST00000493026 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
PSMD11-205ENST00000493026 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
PSMD11-205ENST00000493026 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
PSMD11-205ENST00000493026 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
PSMD11-205ENST00000493026 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
PSMD11-205ENST00000493026 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
PSMD11-205ENST00000493026 WIZO95785 1651 aa20.15■□□□□ 0.82
PSMD11-205ENST00000493026 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
PSMD11-205ENST00000493026 TULP1O00294 542 aaPredicted RBP20.08■□□□□ 0.81
PSMD11-205ENST00000493026 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
PSMD11-205ENST00000493026 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
PSMD11-205ENST00000493026 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
PSMD11-205ENST00000493026 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
PSMD11-205ENST00000493026 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
PSMD11-205ENST00000493026 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
PSMD11-205ENST00000493026 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
PSMD11-205ENST00000493026 BCANQ96GW7 911 aa19.97■□□□□ 0.79
PSMD11-205ENST00000493026 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
PSMD11-205ENST00000493026 ARXQ96QS3 562 aa19.94■□□□□ 0.78
PSMD11-205ENST00000493026 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
PSMD11-205ENST00000493026 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
PSMD11-205ENST00000493026 SMARCA2P51531 1590 aa19.83■□□□□ 0.77
PSMD11-205ENST00000493026 HAP1P54257 671 aaPredicted RBP19.83■□□□□ 0.76
PSMD11-205ENST00000493026 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
PSMD11-205ENST00000493026 FKBP8Q14318 412 aa19.77■□□□□ 0.75
PSMD11-205ENST00000493026 EEA1Q15075 1411 aa19.75■□□□□ 0.75
PSMD11-205ENST00000493026 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
PSMD11-205ENST00000493026 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
PSMD11-205ENST00000493026 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
PSMD11-205ENST00000493026 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
PSMD11-205ENST00000493026 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
PSMD11-205ENST00000493026 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
PSMD11-205ENST00000493026 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.73
PSMD11-205ENST00000493026 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
PSMD11-205ENST00000493026 SOGA1O94964 1423 aa19.56■□□□□ 0.72
PSMD11-205ENST00000493026 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
PSMD11-205ENST00000493026 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
PSMD11-205ENST00000493026 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
PSMD11-205ENST00000493026 HOMEZQ8IX15 550 aa19.42■□□□□ 0.7
PSMD11-205ENST00000493026 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
PSMD11-205ENST00000493026 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
PSMD11-205ENST00000493026 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
PSMD11-205ENST00000493026 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
PSMD11-205ENST00000493026 KIF21BO75037 1637 aa19.38■□□□□ 0.69
PSMD11-205ENST00000493026 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
PSMD11-205ENST00000493026 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
PSMD11-205ENST00000493026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
PSMD11-205ENST00000493026 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
PSMD11-205ENST00000493026 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
PSMD11-205ENST00000493026 FBLN2P98095 1184 aa19.23■□□□□ 0.67
PSMD11-205ENST00000493026 CLIP1P30622 1438 aa19.21■□□□□ 0.67
PSMD11-205ENST00000493026 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
PSMD11-205ENST00000493026 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
PSMD11-205ENST00000493026 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
PSMD11-205ENST00000493026 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
PSMD11-205ENST00000493026 KLHL34Q8N239 644 aa19.15■□□□□ 0.66
PSMD11-205ENST00000493026 HMGXB3Q12766 1538 aa19.14■□□□□ 0.66
PSMD11-205ENST00000493026 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
PSMD11-205ENST00000493026 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
PSMD11-205ENST00000493026 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
PSMD11-205ENST00000493026 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
PSMD11-205ENST00000493026 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
PSMD11-205ENST00000493026 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
PSMD11-205ENST00000493026 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
PSMD11-205ENST00000493026 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
PSMD11-205ENST00000493026 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
PSMD11-205ENST00000493026 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms